Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.65□□□□□ -1.66
Trim3Q9R1R2 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.65□□□□□ -1.66
Trim3Q9R1R2 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Trim3Q9R1R2 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.65□□□□□ -1.66
Trim3Q9R1R2 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Trim3Q9R1R2 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Trim3Q9R1R2 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Trim3Q9R1R2 Gm14046-201ENSMUST00000119389 509 ntBASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Gm14125-202ENSMUST00000120921 756 ntBASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Gm15534-201ENSMUST00000137642 562 ntBASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Gm23441-201ENSMUST00000157268 127 ntBASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Gm23902-201ENSMUST00000157571 134 ntBASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Gm25669-201ENSMUST00000157699 112 ntBASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Mir5103-201ENSMUST00000175111 79 ntBASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Gm27818-201ENSMUST00000184536 159 ntBASIC4.65□□□□□ -1.67
Trim3Q9R1R2 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Gm9443-201ENSMUST00000188406 816 ntBASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Gm9134-201ENSMUST00000193186 551 ntBASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Gm18843-201ENSMUST00000194982 719 ntBASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Gm9038-201ENSMUST00000203400 604 ntBASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Gm44604-201ENSMUST00000205475 496 ntBASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Gm20946-201ENSMUST00000212367 461 ntBASIC4.65□□□□□ -1.67
Trim3Q9R1R2 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.65□□□□□ -1.67
Trim3Q9R1R2 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trim3Q9R1R2 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm12261-201ENSMUST00000117499 645 ntBASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm12717-201ENSMUST00000118427 983 ntBASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm15357-201ENSMUST00000119160 285 ntBASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm15828-201ENSMUST00000119911 522 ntBASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm13452-201ENSMUST00000120896 1097 ntBASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm23965-201ENSMUST00000157969 142 ntBASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm23897-201ENSMUST00000158110 158 ntBASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm26404-201ENSMUST00000158498 109 ntBASIC4.64□□□□□ -1.67
Trim3Q9R1R2 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm29484-201ENSMUST00000186067 324 ntBASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Ighv1-3-201ENSMUST00000192764 302 ntBASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm43093-201ENSMUST00000202439 1213 ntBASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm19065-202ENSMUST00000203910 1165 ntBASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm32453-201ENSMUST00000204183 456 ntBASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.64□□□□□ -1.67
Trim3Q9R1R2 CT030030.1-201ENSMUST00000218809 152 ntBASIC4.64□□□□□ -1.67
Trim3Q9R1R2 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 AC154851.2-201ENSMUST00000222172 644 ntBASIC4.64□□□□□ -1.67
Trim3Q9R1R2 CT030194.2-201ENSMUST00000225752 379 ntBASIC4.64□□□□□ -1.67
Trim3Q9R1R2 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Trim3Q9R1R2 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC4.63□□□□□ -1.67
Trim3Q9R1R2 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms