Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm10997-201ENSMUST00000210294 1500 ntBASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm11971-201ENSMUST00000117715 288 ntBASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm11826-201ENSMUST00000118781 438 ntBASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm14620-201ENSMUST00000120656 383 ntBASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm25459-201ENSMUST00000157953 114 ntBASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm18358-201ENSMUST00000173179 1277 ntBASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm37751-201ENSMUST00000192440 1198 ntBASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm37719-201ENSMUST00000194615 292 ntBASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm4874-201ENSMUST00000203589 691 ntBASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm44134-202ENSMUST00000204777 545 ntBASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm23677-201ENSMUST00000083156 104 ntBASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm24254-201ENSMUST00000083702 104 ntBASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ddx56Q9D0R4 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm4989-201ENSMUST00000118711 749 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm7485-201ENSMUST00000119502 1109 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm12287-201ENSMUST00000119770 707 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm15044-201ENSMUST00000120703 598 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm13489-201ENSMUST00000121234 971 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm14732-201ENSMUST00000121372 545 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm23959-201ENSMUST00000157208 324 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm23754-201ENSMUST00000157576 63 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm25445-201ENSMUST00000158996 299 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm18199-201ENSMUST00000173820 835 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm8419-201ENSMUST00000189886 412 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm29516-201ENSMUST00000190402 468 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm36998-201ENSMUST00000193205 704 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm7733-201ENSMUST00000199038 919 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm2623-201ENSMUST00000199229 286 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm18268-201ENSMUST00000208445 943 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gm5087-204ENSMUST00000225820 645 ntBASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ddx56Q9D0R4 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms