Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm36939-201ENSMUST00000194889 439 ntBASIC4.56□□□□□ -1.68
Use1Q9CQ56 Gm18867-201ENSMUST00000198022 1179 ntBASIC4.56□□□□□ -1.68
Use1Q9CQ56 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Gm44485-201ENSMUST00000199569 137 ntBASIC4.56□□□□□ -1.68
Use1Q9CQ56 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.56□□□□□ -1.68
Use1Q9CQ56 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC4.56□□□□□ -1.68
Use1Q9CQ56 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Use1Q9CQ56 AC162376.1-201ENSMUST00000220120 435 ntBASIC4.56□□□□□ -1.68
Use1Q9CQ56 AC192333.6-201ENSMUST00000224565 725 ntBASIC4.56□□□□□ -1.68
Use1Q9CQ56 Gm4963-201ENSMUST00000072718 378 ntBASIC4.56□□□□□ -1.68
Use1Q9CQ56 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Gm9386-201ENSMUST00000095195 381 ntBASIC4.56□□□□□ -1.68
Use1Q9CQ56 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.56□□□□□ -1.68
Use1Q9CQ56 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Use1Q9CQ56 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Use1Q9CQ56 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Mup-ps28-201ENSMUST00000120686 289 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm13132-201ENSMUST00000121194 472 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm12893-201ENSMUST00000121732 275 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm16259-201ENSMUST00000145241 553 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm23171-201ENSMUST00000157159 264 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm22261-201ENSMUST00000158691 324 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm10319-202ENSMUST00000159439 846 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm7281-201ENSMUST00000160010 543 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm25037-201ENSMUST00000175418 110 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm5777-201ENSMUST00000177265 448 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm18348-201ENSMUST00000191227 820 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm5842-201ENSMUST00000195073 622 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm43825-201ENSMUST00000199650 734 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm3800-201ENSMUST00000221086 554 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm7822-201ENSMUST00000222433 581 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm7768-201ENSMUST00000222988 597 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 Rybp-ps-201ENSMUST00000069489 681 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm24706-201ENSMUST00000082806 137 ntBASIC4.55□□□□□ -1.68
Use1Q9CQ56 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Use1Q9CQ56 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Use1Q9CQ56 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Gm12423-201ENSMUST00000118334 135 ntBASIC4.54□□□□□ -1.68
Use1Q9CQ56 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC4.54□□□□□ -1.68
Use1Q9CQ56 Mir6416-201ENSMUST00000183664 117 ntBASIC4.54□□□□□ -1.68
Use1Q9CQ56 Gm29484-201ENSMUST00000186067 324 ntBASIC4.54□□□□□ -1.68
Use1Q9CQ56 Gm29668-201ENSMUST00000187802 315 ntBASIC4.54□□□□□ -1.68
Use1Q9CQ56 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Gm37884-201ENSMUST00000191857 818 ntBASIC4.54□□□□□ -1.68
Use1Q9CQ56 Gm37243-201ENSMUST00000193407 595 ntBASIC4.54□□□□□ -1.68
Use1Q9CQ56 Gm37908-201ENSMUST00000195828 470 ntBASIC4.54□□□□□ -1.68
Use1Q9CQ56 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Use1Q9CQ56 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Gm44048-201ENSMUST00000204531 361 ntBASIC4.54□□□□□ -1.68
Use1Q9CQ56 Gm44683-201ENSMUST00000209088 484 ntBASIC4.54□□□□□ -1.68
Use1Q9CQ56 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Use1Q9CQ56 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC4.54□□□□□ -1.68
Use1Q9CQ56 AC159622.1-201ENSMUST00000221004 554 ntBASIC4.54□□□□□ -1.68
Use1Q9CQ56 Gm9472-201ENSMUST00000221625 526 ntBASIC4.54□□□□□ -1.68
Use1Q9CQ56 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms