Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm26346-201ENSMUST00000157525 329 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm23902-201ENSMUST00000157571 134 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm25185-201ENSMUST00000157754 96 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm23896-201ENSMUST00000158109 130 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm24393-201ENSMUST00000158135 97 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm15970-201ENSMUST00000160623 834 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm17421-201ENSMUST00000167845 674 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm2930-201ENSMUST00000170403 474 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm24080-201ENSMUST00000175178 232 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm1972-201ENSMUST00000181606 964 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm28788-201ENSMUST00000189717 375 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm29558-201ENSMUST00000190134 375 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm4859-201ENSMUST00000199625 787 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm43810-201ENSMUST00000201018 232 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm7570-201ENSMUST00000215246 698 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 AC102603.1-201ENSMUST00000227481 584 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm23624-201ENSMUST00000082463 321 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm23970-201ENSMUST00000083319 107 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm26176-201ENSMUST00000083795 105 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm10997-201ENSMUST00000210294 1500 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim8Q99PJ2 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Fus-202ENSMUST00000079045 2623 ntBASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Gm11854-201ENSMUST00000117839 446 ntBASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Gm13772-201ENSMUST00000118431 317 ntBASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Gm15267-201ENSMUST00000120888 464 ntBASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Gm24383-201ENSMUST00000122691 333 ntBASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Gm24444-201ENSMUST00000157244 308 ntBASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Gm3141-201ENSMUST00000168726 499 ntBASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Mir6992-201ENSMUST00000183342 109 ntBASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Gm38281-201ENSMUST00000192301 315 ntBASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Gm3351-201ENSMUST00000193454 505 ntBASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Gm7181-201ENSMUST00000202197 434 ntBASIC5.57□□□□□ -1.52
Trim8Q99PJ2 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms