Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm13451-201ENSMUST00000117649 592 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm13503-201ENSMUST00000119017 446 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm23837-201ENSMUST00000122656 286 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm23993-201ENSMUST00000157478 144 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm22261-201ENSMUST00000158691 324 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm6673-201ENSMUST00000166114 700 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm21045-201ENSMUST00000183058 1020 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm27820-201ENSMUST00000183628 175 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm36974-201ENSMUST00000194200 1071 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm36997-201ENSMUST00000195090 707 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm42509-201ENSMUST00000197390 781 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm42459-201ENSMUST00000199679 742 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm7838-201ENSMUST00000203221 1189 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 AC153516.1-201ENSMUST00000217955 779 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 AC192088.3-201ENSMUST00000227858 831 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm24706-201ENSMUST00000082806 137 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Mir133b-201ENSMUST00000083546 119 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm25187-201ENSMUST00000083906 133 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 AC151734.1-201ENSMUST00000227023 1740 ntBASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Gm44248-201ENSMUST00000203079 1549 ntBASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Gm25595-201ENSMUST00000102273 97 ntBASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Gm26067-201ENSMUST00000103789 110 ntBASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Gm24789-201ENSMUST00000104282 131 ntBASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Gm14795-201ENSMUST00000118461 471 ntBASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Ear-ps9-201ENSMUST00000161963 460 ntBASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Gm8358-201ENSMUST00000167222 555 ntBASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Gm18177-201ENSMUST00000188373 404 ntBASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Gm9173-201ENSMUST00000198054 400 ntBASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 AC123064.1-201ENSMUST00000218950 406 ntBASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 AC132317.2-201ENSMUST00000227301 519 ntBASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Gm26072-201ENSMUST00000083135 107 ntBASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Mir199a-2-201ENSMUST00000093618 110 ntBASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Gm10704-201ENSMUST00000098952 730 ntBASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Brf1Q8CFK2 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Brf1Q8CFK2 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Brf1Q8CFK2 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.41
Brf1Q8CFK2 Gm36963-201ENSMUST00000193506 2324 ntBASIC6.21□□□□□ -1.41
Brf1Q8CFK2 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Brf1Q8CFK2 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Brf1Q8CFK2 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
Brf1Q8CFK2 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms