Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Nup88Q8CEC0 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nup88Q8CEC0 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Nup88Q8CEC0 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Gm23948-201ENSMUST00000104030 132 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Gm22899-201ENSMUST00000104540 131 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Gm24855-201ENSMUST00000104848 97 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Gm14575-201ENSMUST00000117210 560 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Gm12807-201ENSMUST00000121546 962 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Gm15022-201ENSMUST00000122074 746 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Gm24188-201ENSMUST00000157980 108 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Gm8214-201ENSMUST00000172123 351 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Gm24949-201ENSMUST00000183609 215 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Gm28439-201ENSMUST00000187714 876 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Gm21742-201ENSMUST00000189352 548 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Gm37629-201ENSMUST00000193635 1050 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Gm36986-201ENSMUST00000195320 353 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Gm9238-201ENSMUST00000196181 329 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Rnu3a-202ENSMUST00000196710 213 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Gm44952-201ENSMUST00000204443 433 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Gm45078-201ENSMUST00000205343 546 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Gm46191-201ENSMUST00000218899 433 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Olfr480-201ENSMUST00000071658 1029 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Mir129-2-201ENSMUST00000083577 90 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Rnu3a-201ENSMUST00000083936 214 ntBASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nup88Q8CEC0 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Gm23746-201ENSMUST00000104229 125 ntBASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Gm11212-201ENSMUST00000118337 618 ntBASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Gm12854-201ENSMUST00000128518 297 ntBASIC5.74□□□□□ -1.49
Nup88Q8CEC0 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Gm16456-201ENSMUST00000174431 920 ntBASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Gm28503-201ENSMUST00000185966 147 ntBASIC5.74□□□□□ -1.49
Nup88Q8CEC0 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Gm5511-201ENSMUST00000189380 802 ntBASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Gm20177-201ENSMUST00000203705 334 ntBASIC5.74□□□□□ -1.49
Nup88Q8CEC0 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.74□□□□□ -1.49
Nup88Q8CEC0 AC154441.1-201ENSMUST00000223653 1006 ntBASIC5.74□□□□□ -1.49
Nup88Q8CEC0 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.74□□□□□ -1.49
Nup88Q8CEC0 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.74□□□□□ -1.49
Nup88Q8CEC0 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Gm7665-201ENSMUST00000076710 297 ntBASIC5.74□□□□□ -1.49
Nup88Q8CEC0 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Gm22826-201ENSMUST00000083774 165 ntBASIC5.74□□□□□ -1.49
Nup88Q8CEC0 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup88Q8CEC0 AC134860.3-201ENSMUST00000223564 1300 ntBASIC5.74□□□□□ -1.49
Nup88Q8CEC0 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Nup88Q8CEC0 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Nup88Q8CEC0 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.73□□□□□ -1.49
Nup88Q8CEC0 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nup88Q8CEC0 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.73□□□□□ -1.49
Nup88Q8CEC0 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Nup88Q8CEC0 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nup88Q8CEC0 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Nup88Q8CEC0 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC5.73□□□□□ -1.49
Nup88Q8CEC0 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms