Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC6.55□□□□□ -1.36
Usp47Q8BY87 CT025552.2-201ENSMUST00000225497 317 ntBASIC6.55□□□□□ -1.36
Usp47Q8BY87 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Usp47Q8BY87 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Usp47Q8BY87 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Usp47Q8BY87 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Usp47Q8BY87 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Usp47Q8BY87 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Usp47Q8BY87 Gm43185-201ENSMUST00000197507 2775 ntBASIC6.54□□□□□ -1.36
Usp47Q8BY87 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Usp47Q8BY87 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Usp47Q8BY87 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Usp47Q8BY87 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Usp47Q8BY87 Igkv11-106-201ENSMUST00000103331 346 ntBASIC6.54□□□□□ -1.36
Usp47Q8BY87 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Usp47Q8BY87 Gm14304-201ENSMUST00000117272 446 ntBASIC6.54□□□□□ -1.36
Usp47Q8BY87 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Usp47Q8BY87 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC6.54□□□□□ -1.36
Usp47Q8BY87 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Usp47Q8BY87 Gm20701-201ENSMUST00000176082 347 ntBASIC6.54□□□□□ -1.36
Usp47Q8BY87 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC6.54□□□□□ -1.36
Usp47Q8BY87 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Usp47Q8BY87 Mir6391-201ENSMUST00000184391 104 ntBASIC6.54□□□□□ -1.36
Usp47Q8BY87 Gm44779-201ENSMUST00000206937 708 ntBASIC6.54□□□□□ -1.36
Usp47Q8BY87 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC6.54□□□□□ -1.36
Usp47Q8BY87 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Usp47Q8BY87 Gm2123-201ENSMUST00000221476 2836 ntBASIC6.54□□□□□ -1.36
Usp47Q8BY87 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Usp47Q8BY87 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Usp47Q8BY87 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Usp47Q8BY87 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Usp47Q8BY87 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC6.53□□□□□ -1.36
Usp47Q8BY87 Gm43188-201ENSMUST00000200180 2160 ntBASIC6.53□□□□□ -1.36
Usp47Q8BY87 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC6.53□□□□□ -1.36
Usp47Q8BY87 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Usp47Q8BY87 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp47Q8BY87 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Usp47Q8BY87 Gm21816-201ENSMUST00000179255 360 ntBASIC6.53□□□□□ -1.36
Usp47Q8BY87 Gm4842-201ENSMUST00000183237 835 ntBASIC6.53□□□□□ -1.36
Usp47Q8BY87 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Usp47Q8BY87 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC6.53□□□□□ -1.36
Usp47Q8BY87 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC6.53□□□□□ -1.36
Usp47Q8BY87 Gm4734-201ENSMUST00000200117 777 ntBASIC6.53□□□□□ -1.36
Usp47Q8BY87 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Usp47Q8BY87 AC158523.2-201ENSMUST00000222708 548 ntBASIC6.53□□□□□ -1.36
Usp47Q8BY87 Gm19154-201ENSMUST00000223330 940 ntBASIC6.53□□□□□ -1.36
Usp47Q8BY87 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Usp47Q8BY87 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC6.53□□□□□ -1.36
Usp47Q8BY87 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Usp47Q8BY87 AC108802.1-201ENSMUST00000219501 3142 ntBASIC6.53□□□□□ -1.36
Usp47Q8BY87 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Usp47Q8BY87 AC155805.1-201ENSMUST00000222419 3808 ntBASIC6.52□□□□□ -1.36
Usp47Q8BY87 Gm37762-201ENSMUST00000194515 3561 ntBASIC6.52□□□□□ -1.36
Usp47Q8BY87 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Usp47Q8BY87 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Usp47Q8BY87 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.52□□□□□ -1.37
Usp47Q8BY87 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.52□□□□□ -1.37
Usp47Q8BY87 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
Usp47Q8BY87 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Usp47Q8BY87 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Usp47Q8BY87 Gm6884-201ENSMUST00000119318 615 ntBASIC6.52□□□□□ -1.37
Usp47Q8BY87 Gm12852-201ENSMUST00000119478 719 ntBASIC6.52□□□□□ -1.37
Usp47Q8BY87 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC6.52□□□□□ -1.37
Usp47Q8BY87 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Usp47Q8BY87 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC6.52□□□□□ -1.37
Usp47Q8BY87 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC6.52□□□□□ -1.37
Usp47Q8BY87 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC6.52□□□□□ -1.37
Usp47Q8BY87 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC6.52□□□□□ -1.37
Usp47Q8BY87 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC6.52□□□□□ -1.37
Usp47Q8BY87 Gm37878-201ENSMUST00000192108 387 ntBASIC6.52□□□□□ -1.37
Usp47Q8BY87 Gm2059-201ENSMUST00000212025 287 ntBASIC6.52□□□□□ -1.37
Usp47Q8BY87 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC6.52□□□□□ -1.37
Usp47Q8BY87 AC121804.1-201ENSMUST00000221016 394 ntBASIC6.52□□□□□ -1.37
Usp47Q8BY87 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Usp47Q8BY87 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Usp47Q8BY87 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
Usp47Q8BY87 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Usp47Q8BY87 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
Usp47Q8BY87 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Usp47Q8BY87 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Usp47Q8BY87 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Usp47Q8BY87 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Usp47Q8BY87 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Usp47Q8BY87 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC6.51□□□□□ -1.37
Usp47Q8BY87 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Usp47Q8BY87 Klra14-ps-201ENSMUST00000119532 802 ntBASIC6.51□□□□□ -1.37
Usp47Q8BY87 Gm14619-201ENSMUST00000120480 168 ntBASIC6.51□□□□□ -1.37
Usp47Q8BY87 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
Usp47Q8BY87 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Usp47Q8BY87 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Usp47Q8BY87 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Usp47Q8BY87 Gm23638-201ENSMUST00000175073 126 ntBASIC6.51□□□□□ -1.37
Usp47Q8BY87 Gm23158-201ENSMUST00000175076 126 ntBASIC6.51□□□□□ -1.37
Usp47Q8BY87 Gm22907-201ENSMUST00000175198 126 ntBASIC6.51□□□□□ -1.37
Usp47Q8BY87 Gm22625-201ENSMUST00000175382 126 ntBASIC6.51□□□□□ -1.37
Usp47Q8BY87 Gm22875-201ENSMUST00000175449 126 ntBASIC6.51□□□□□ -1.37
Usp47Q8BY87 Gm25197-201ENSMUST00000175516 126 ntBASIC6.51□□□□□ -1.37
Usp47Q8BY87 Gm27857-201ENSMUST00000176930 126 ntBASIC6.51□□□□□ -1.37
Usp47Q8BY87 Gm26268-201ENSMUST00000177685 126 ntBASIC6.51□□□□□ -1.37
Usp47Q8BY87 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms