Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm37174-201ENSMUST00000194699 3058 ntBASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.24□□□□□ -1.25
Usp40Q8BWR4 Smc5-206ENSMUST00000226111 3265 ntBASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Gm15670-201ENSMUST00000117740 447 ntBASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Gm15916-201ENSMUST00000118355 736 ntBASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Gm15361-201ENSMUST00000119320 444 ntBASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Gm15828-201ENSMUST00000119911 522 ntBASIC7.23□□□□□ -1.25
Usp40Q8BWR4 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Gm6632-201ENSMUST00000168425 954 ntBASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Gm27864-201ENSMUST00000183704 190 ntBASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Gm37710-201ENSMUST00000193501 1274 ntBASIC7.23□□□□□ -1.25
Usp40Q8BWR4 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Gm43848-201ENSMUST00000198060 1247 ntBASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Amd-ps5-201ENSMUST00000198406 989 ntBASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Gm18452-201ENSMUST00000202968 1111 ntBASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Gm45628-201ENSMUST00000210849 274 ntBASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Gm9685-201ENSMUST00000211275 538 ntBASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC7.23□□□□□ -1.25
Usp40Q8BWR4 CT025616.1-201ENSMUST00000221158 412 ntBASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Gm6369-201ENSMUST00000069626 412 ntBASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Gm12667-201ENSMUST00000118299 1332 ntBASIC7.23□□□□□ -1.25
Usp40Q8BWR4 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Usp40Q8BWR4 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 AC122408.2-201ENSMUST00000217901 1391 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm43485-201ENSMUST00000199292 1710 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm18186-201ENSMUST00000192239 1580 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 AC192333.5-201ENSMUST00000224620 2350 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm24578-201ENSMUST00000103970 129 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm11387-201ENSMUST00000120266 772 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm15791-201ENSMUST00000120365 319 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm13452-201ENSMUST00000120896 1097 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm11260-201ENSMUST00000121163 942 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm11909-201ENSMUST00000121424 759 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm13459-201ENSMUST00000121558 646 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm12317-201ENSMUST00000122307 319 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm22160-201ENSMUST00000158405 328 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm23186-201ENSMUST00000180078 107 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm27551-201ENSMUST00000184258 77 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm37771-201ENSMUST00000193121 265 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm34015-201ENSMUST00000194908 451 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm43954-201ENSMUST00000204634 544 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm3912-203ENSMUST00000211024 367 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm2607-201ENSMUST00000212389 627 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Gm20644-201ENSMUST00000176721 2063 ntBASIC7.22□□□□□ -1.25
Usp40Q8BWR4 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms