Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm14786-201ENSMUST00000117127 944 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Gm14871-201ENSMUST00000119056 194 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Gm15166-201ENSMUST00000120790 385 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Gm7350-201ENSMUST00000120964 636 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Gm12752-201ENSMUST00000121657 811 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Gm8241-201ENSMUST00000189286 816 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Trbv28-201ENSMUST00000192804 264 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Gm37072-201ENSMUST00000194570 837 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Gm38334-201ENSMUST00000195060 313 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Mir6906-201ENSMUST00000198998 58 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 AC161250.1-201ENSMUST00000213426 1111 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 AC153532.1-201ENSMUST00000218126 1111 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Nsa2-203ENSMUST00000225410 974 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp2bQ8BJF9 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm23910-201ENSMUST00000104597 132 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm12768-201ENSMUST00000120055 759 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm24383-201ENSMUST00000122691 333 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm24854-201ENSMUST00000158025 98 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Mir6400-201ENSMUST00000184870 92 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm18728-201ENSMUST00000186155 753 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm28429-201ENSMUST00000188521 363 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm43054-201ENSMUST00000199495 884 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm43794-201ENSMUST00000200971 692 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm44261-201ENSMUST00000203337 209 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm45777-201ENSMUST00000213009 301 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm18377-201ENSMUST00000215141 607 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 AC121912.1-201ENSMUST00000227525 1201 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Neat1-201ENSMUST00000173672 20771 ntBASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC5.02□□□□□ -1.61
Chmp2bQ8BJF9 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.01□□□□□ -1.61
Chmp2bQ8BJF9 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Chmp2bQ8BJF9 Gm43216-201ENSMUST00000196295 1333 ntBASIC5.01□□□□□ -1.61
Chmp2bQ8BJF9 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.01□□□□□ -1.61
Chmp2bQ8BJF9 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Chmp2bQ8BJF9 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.01□□□□□ -1.61
Chmp2bQ8BJF9 Gm2033-201ENSMUST00000210753 2287 ntBASIC5.01□□□□□ -1.61
Chmp2bQ8BJF9 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
Chmp2bQ8BJF9 Gm11912-201ENSMUST00000117235 264 ntBASIC5.01□□□□□ -1.61
Chmp2bQ8BJF9 Gm12423-201ENSMUST00000118334 135 ntBASIC5.01□□□□□ -1.61
Chmp2bQ8BJF9 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Chmp2bQ8BJF9 Gm8061-201ENSMUST00000122380 350 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms