Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 AC166574.7-201ENSMUST00000228502 704 ntBASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.21□□□□□ -1.58
Ccdc40Q8BI79 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Gm45517-201ENSMUST00000209973 2468 ntBASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Gm25758-201ENSMUST00000103987 129 ntBASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Gm7973-201ENSMUST00000122107 488 ntBASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Gm7316-201ENSMUST00000165395 445 ntBASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Gm28639-201ENSMUST00000191519 481 ntBASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Mir142-201ENSMUST00000198092 64 ntBASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Gm43825-201ENSMUST00000199650 734 ntBASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Gm42927-201ENSMUST00000200624 3841 ntBASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Gm19201-201ENSMUST00000210127 778 ntBASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Gm44321-201ENSMUST00000204262 2855 ntBASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Ccdc40Q8BI79 Gm7754-201ENSMUST00000223075 2064 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Gm14521-201ENSMUST00000119545 350 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Gm23467-201ENSMUST00000157127 159 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Gm23958-201ENSMUST00000157207 105 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Mir3080-201ENSMUST00000175010 79 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Gm9457-201ENSMUST00000180176 372 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Mir6921-201ENSMUST00000183719 80 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Gm37934-201ENSMUST00000192902 402 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Gm42459-201ENSMUST00000199679 742 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Gm18011-201ENSMUST00000203717 565 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Gm36371-201ENSMUST00000209043 1103 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 AC130536.1-201ENSMUST00000224425 271 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 AC106830.1-201ENSMUST00000228032 1003 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Gm26330-201ENSMUST00000082817 104 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc40Q8BI79 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms