Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ddx55Q6ZPL9 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ddx55Q6ZPL9 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ddx55Q6ZPL9 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ddx55Q6ZPL9 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm43178-201ENSMUST00000197257 1386 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm7529-201ENSMUST00000213753 1897 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm44801-201ENSMUST00000207644 2060 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm23942-201ENSMUST00000101956 107 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm25096-201ENSMUST00000104043 129 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm14046-201ENSMUST00000119389 509 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm24186-201ENSMUST00000157983 127 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Mir6412-201ENSMUST00000184477 97 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm37098-201ENSMUST00000192290 244 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm37641-201ENSMUST00000193837 239 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm36986-201ENSMUST00000195320 353 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm42459-201ENSMUST00000199679 742 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm9245-201ENSMUST00000200528 983 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm4714-201ENSMUST00000203395 279 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 CT025525.4-201ENSMUST00000227728 277 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm37311-201ENSMUST00000195541 2024 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm43359-201ENSMUST00000197944 2200 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Gm42702-201ENSMUST00000199515 4217 ntBASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ddx55Q6ZPL9 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm33378-201ENSMUST00000219831 2758 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 AC153881.3-201ENSMUST00000218494 1561 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm15125-201ENSMUST00000116185 800 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm22468-201ENSMUST00000116680 120 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm26248-201ENSMUST00000116700 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm26137-201ENSMUST00000116701 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm26190-201ENSMUST00000116704 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm24617-201ENSMUST00000116705 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm25778-201ENSMUST00000116713 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm25774-201ENSMUST00000116717 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm22102-201ENSMUST00000116730 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm23177-201ENSMUST00000116784 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm24193-201ENSMUST00000116801 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm24744-201ENSMUST00000116833 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm24427-201ENSMUST00000116896 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm22346-201ENSMUST00000116918 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm23606-201ENSMUST00000116938 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm22029-201ENSMUST00000116940 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm26298-201ENSMUST00000116956 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm23844-201ENSMUST00000116959 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm24484-201ENSMUST00000117009 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm25347-201ENSMUST00000117026 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm22112-201ENSMUST00000117032 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm14879-201ENSMUST00000117308 507 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm10241-201ENSMUST00000117664 286 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm15297-201ENSMUST00000117795 290 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm14795-201ENSMUST00000118461 471 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm12889-201ENSMUST00000118684 241 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm26424-201ENSMUST00000122530 104 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm12854-201ENSMUST00000128518 297 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm10074-201ENSMUST00000174543 249 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm22991-201ENSMUST00000178126 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm25754-201ENSMUST00000178653 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm22419-201ENSMUST00000178780 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm24802-201ENSMUST00000178897 121 ntBASIC6.06□□□□□ -1.44
Ddx55Q6ZPL9 Gm25208-201ENSMUST00000178964 121 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms