Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Herc4Q6PAV2 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Gm25096-201ENSMUST00000104043 129 ntBASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Gm15493-201ENSMUST00000119461 528 ntBASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Gm25103-201ENSMUST00000122671 318 ntBASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Gm25290-201ENSMUST00000122796 144 ntBASIC5.28□□□□□ -1.56
Herc4Q6PAV2 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Gm22940-201ENSMUST00000158560 155 ntBASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Gm16107-201ENSMUST00000162523 862 ntBASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Mir7028-201ENSMUST00000185016 64 ntBASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Gm28389-201ENSMUST00000190090 697 ntBASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Gm44261-201ENSMUST00000203337 209 ntBASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Gm44816-201ENSMUST00000206666 477 ntBASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Gm19170-201ENSMUST00000212440 1084 ntBASIC5.28□□□□□ -1.56
Herc4Q6PAV2 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC5.28□□□□□ -1.56
Herc4Q6PAV2 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.28□□□□□ -1.56
Herc4Q6PAV2 AC131100.2-201ENSMUST00000227701 998 ntBASIC5.28□□□□□ -1.56
Herc4Q6PAV2 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Gm18719-201ENSMUST00000196696 1413 ntBASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Herc4Q6PAV2 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Gm16089-201ENSMUST00000117679 336 ntBASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Gm14706-201ENSMUST00000117744 255 ntBASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Gm7312-201ENSMUST00000118798 469 ntBASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Gm11759-201ENSMUST00000121742 464 ntBASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Gm15534-201ENSMUST00000137642 562 ntBASIC5.27□□□□□ -1.57
Herc4Q6PAV2 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Gm23546-201ENSMUST00000158211 137 ntBASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Gm3531-201ENSMUST00000162698 489 ntBASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Gm28976-201ENSMUST00000188070 144 ntBASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Gm42663-201ENSMUST00000199883 351 ntBASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 AL589696.1-201ENSMUST00000225711 330 ntBASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Mir30b-201ENSMUST00000083542 96 ntBASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.27□□□□□ -1.57
Herc4Q6PAV2 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Herc4Q6PAV2 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Herc4Q6PAV2 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Gm22676-201ENSMUST00000116972 129 ntBASIC5.26□□□□□ -1.57
Herc4Q6PAV2 Gm15297-201ENSMUST00000117795 290 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms