Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.45□□□□□ -1.54
Sp140Q6NSQ5 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Sp140Q6NSQ5 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm22953-201ENSMUST00000116724 101 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm13681-201ENSMUST00000117925 210 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm24383-201ENSMUST00000122691 333 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm9428-201ENSMUST00000127214 769 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm23145-201ENSMUST00000178912 79 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm27942-201ENSMUST00000184669 101 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm6680-201ENSMUST00000192789 950 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm38279-201ENSMUST00000194067 1131 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm18861-201ENSMUST00000202509 1186 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm44074-201ENSMUST00000204562 337 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm44277-201ENSMUST00000205128 649 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm17850-201ENSMUST00000210023 1154 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 AC153957.1-201ENSMUST00000215235 229 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 AC157085.1-201ENSMUST00000216343 162 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 AC167669.3-201ENSMUST00000224720 393 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm26072-201ENSMUST00000083135 107 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 n-R5s196-201ENSMUST00000083136 117 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gm23104-201ENSMUST00000083722 104 ntBASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Sp140Q6NSQ5 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Gm25773-201ENSMUST00000116718 127 ntBASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Gm26350-201ENSMUST00000157531 288 ntBASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Gm26489-201ENSMUST00000157880 264 ntBASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Gm22518-201ENSMUST00000158267 68 ntBASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Gm25363-201ENSMUST00000158850 245 ntBASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Gm10087-201ENSMUST00000167650 330 ntBASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Gm24080-201ENSMUST00000175178 232 ntBASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Gm4412-201ENSMUST00000186660 433 ntBASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Gm38061-201ENSMUST00000192490 365 ntBASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Amd-ps5-201ENSMUST00000198406 989 ntBASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Gm19617-201ENSMUST00000202977 308 ntBASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Gm45700-201ENSMUST00000205866 347 ntBASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Gm8556-201ENSMUST00000210437 664 ntBASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Gm45912-201ENSMUST00000210646 543 ntBASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Gm45485-201ENSMUST00000211229 357 ntBASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 Gm6477-201ENSMUST00000217098 764 ntBASIC5.43□□□□□ -1.54
Sp140Q6NSQ5 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms