Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm28886-202ENSMUST00000187889 484 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm28554-202ENSMUST00000189175 484 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm29213-202ENSMUST00000189703 484 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm28851-202ENSMUST00000189757 484 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm28461-201ENSMUST00000190023 484 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm29454-201ENSMUST00000190805 393 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm43712-201ENSMUST00000198020 291 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.05□□□□□ -1.6
ClpbQ60649 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.05□□□□□ -1.6
ClpbQ60649 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.05□□□□□ -1.6
ClpbQ60649 AC126043.1-201ENSMUST00000221304 1141 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 AV026068-231ENSMUST00000225862 482 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 AC130673.2-201ENSMUST00000228091 797 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 Gm24319-201ENSMUST00000083389 107 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
ClpbQ60649 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
ClpbQ60649 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.05□□□□□ -1.6
ClpbQ60649 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.05□□□□□ -1.6
ClpbQ60649 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ClpbQ60649 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
ClpbQ60649 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ClpbQ60649 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.04□□□□□ -1.6
ClpbQ60649 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.04□□□□□ -1.6
ClpbQ60649 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
ClpbQ60649 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ClpbQ60649 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
ClpbQ60649 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ClpbQ60649 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ClpbQ60649 Smc5-206ENSMUST00000226111 3265 ntBASIC5.04□□□□□ -1.6
ClpbQ60649 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.04□□□□□ -1.6
ClpbQ60649 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ClpbQ60649 Gm25595-201ENSMUST00000102273 97 ntBASIC5.04□□□□□ -1.6
ClpbQ60649 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ClpbQ60649 Mir1192-201ENSMUST00000116976 121 ntBASIC5.04□□□□□ -1.6
ClpbQ60649 Gm14985-201ENSMUST00000118693 786 ntBASIC5.04□□□□□ -1.6
ClpbQ60649 Gm11708-201ENSMUST00000119530 832 ntBASIC5.04□□□□□ -1.6
ClpbQ60649 Gm15828-201ENSMUST00000119911 522 ntBASIC5.04□□□□□ -1.6
ClpbQ60649 Gm9435-201ENSMUST00000120379 877 ntBASIC5.04□□□□□ -1.6
ClpbQ60649 Gm11278-201ENSMUST00000121002 997 ntBASIC5.04□□□□□ -1.6
ClpbQ60649 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.04□□□□□ -1.6
ClpbQ60649 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.04□□□□□ -1.6
ClpbQ60649 Gm22106-201ENSMUST00000122544 127 ntBASIC5.04□□□□□ -1.6
ClpbQ60649 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ClpbQ60649 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC5.04□□□□□ -1.6
ClpbQ60649 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.04□□□□□ -1.6
ClpbQ60649 Mup-ps4-201ENSMUST00000151005 539 ntBASIC5.04□□□□□ -1.6
ClpbQ60649 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC5.04□□□□□ -1.6
ClpbQ60649 Gm25824-201ENSMUST00000157092 121 ntBASIC5.04□□□□□ -1.6
ClpbQ60649 Gm25846-201ENSMUST00000158013 135 ntBASIC5.04□□□□□ -1.6
ClpbQ60649 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 124.5 ms