Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm10552-201ENSMUST00000113396 372 ntBASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Mir7022-201ENSMUST00000183749 61 ntBASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm37495-201ENSMUST00000194590 264 ntBASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm5284-201ENSMUST00000199053 903 ntBASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm7822-201ENSMUST00000222433 581 ntBASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 AC162938.2-205ENSMUST00000217551 2828 ntBASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Mir7658-201ENSMUST00000184043 57 ntBASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm8556-201ENSMUST00000210437 664 ntBASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm19170-201ENSMUST00000212440 1084 ntBASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Ccdc88aQ5SNZ0 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm8823-201ENSMUST00000193158 433 ntBASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Trbv11-201ENSMUST00000194354 260 ntBASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm44002-201ENSMUST00000205134 594 ntBASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 AL589696.1-201ENSMUST00000225711 330 ntBASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 AC174459.2-201ENSMUST00000226036 160 ntBASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc88aQ5SNZ0 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm11506-201ENSMUST00000122414 470 ntBASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm24251-201ENSMUST00000157324 114 ntBASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm23115-201ENSMUST00000158480 108 ntBASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm4134-201ENSMUST00000173244 563 ntBASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm5473-201ENSMUST00000179326 642 ntBASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm6546-201ENSMUST00000192096 766 ntBASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm3338-201ENSMUST00000220982 269 ntBASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm23099-201ENSMUST00000083454 139 ntBASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm15189-201ENSMUST00000121164 1966 ntBASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm24982-201ENSMUST00000104456 132 ntBASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm12332-201ENSMUST00000121397 922 ntBASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm26828-201ENSMUST00000180640 172 ntBASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm28389-201ENSMUST00000190090 697 ntBASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm4322-201ENSMUST00000191094 336 ntBASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm7449-201ENSMUST00000194393 663 ntBASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 AC102603.1-201ENSMUST00000227481 584 ntBASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.45□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms