Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Trim43aQ3TL54 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.09□□□□□ -1.6
Trim43aQ3TL54 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Trim43aQ3TL54 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm12760-201ENSMUST00000117861 482 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm11584-201ENSMUST00000120636 325 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm12041-201ENSMUST00000121606 602 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm12685-201ENSMUST00000121702 214 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm13007-201ENSMUST00000121866 365 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Mir6400-201ENSMUST00000184870 92 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm17953-201ENSMUST00000192061 667 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm37070-201ENSMUST00000193272 460 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm19617-201ENSMUST00000202977 308 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm32453-201ENSMUST00000204183 456 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm44184-201ENSMUST00000204290 132 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm44879-201ENSMUST00000207007 503 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 AC154270.1-201ENSMUST00000227226 426 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm16415-201ENSMUST00000080097 489 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm10916-201ENSMUST00000080330 483 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm24706-201ENSMUST00000082806 137 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Mir134-201ENSMUST00000083492 71 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim43aQ3TL54 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Trim43aQ3TL54 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm15766-201ENSMUST00000118025 813 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm15745-201ENSMUST00000119807 115 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm12893-201ENSMUST00000121732 275 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm22355-201ENSMUST00000175531 96 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm26983-201ENSMUST00000182051 388 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm28957-201ENSMUST00000190174 373 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm43408-201ENSMUST00000198263 440 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm42814-201ENSMUST00000199370 460 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim43aQ3TL54 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm18510-201ENSMUST00000219335 1096 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm20368-201ENSMUST00000220716 301 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm3086-202ENSMUST00000221248 310 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm23514-201ENSMUST00000082827 130 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm22155-201ENSMUST00000083836 162 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.07□□□□□ -1.6
Trim43aQ3TL54 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim43aQ3TL54 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim43aQ3TL54 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim43aQ3TL54 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim43aQ3TL54 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim43aQ3TL54 Gm43605-201ENSMUST00000199663 3426 ntBASIC5.06□□□□□ -1.6
Trim43aQ3TL54 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim43aQ3TL54 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Trim43aQ3TL54 Gm15670-201ENSMUST00000117740 447 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms