Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a1Q00780 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Col8a1Q00780 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm25876-201ENSMUST00000104329 119 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a1Q00780 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a1Q00780 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm14620-201ENSMUST00000120656 383 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm14919-201ENSMUST00000120839 390 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm6067-201ENSMUST00000121648 491 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm26023-201ENSMUST00000122722 313 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC5.2□□□□□ -1.58
Col8a1Q00780 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm11197-201ENSMUST00000145158 839 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm16259-201ENSMUST00000145241 553 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm26312-201ENSMUST00000157769 165 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm23224-201ENSMUST00000158122 271 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm16269-201ENSMUST00000160532 409 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm15838-201ENSMUST00000161575 180 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm9613-201ENSMUST00000171662 196 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a1Q00780 Mir3080-201ENSMUST00000175010 79 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm24303-201ENSMUST00000178237 126 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Mir6367-201ENSMUST00000183385 102 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Mir6417-201ENSMUST00000183815 116 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm8367-201ENSMUST00000186145 887 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a1Q00780 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm44048-201ENSMUST00000204531 361 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm7624-201ENSMUST00000209702 435 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 AC161520.1-201ENSMUST00000210954 939 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm40692-201ENSMUST00000220411 491 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 AC141642.1-201ENSMUST00000220598 229 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm18601-201ENSMUST00000220831 634 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.2□□□□□ -1.58
Col8a1Q00780 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Col8a1Q00780 AC151907.1-201ENSMUST00000228812 412 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Col8a1Q00780 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col8a1Q00780 Mir133b-201ENSMUST00000083546 119 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm26108-201ENSMUST00000083973 191 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.2□□□□□ -1.58
Col8a1Q00780 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col8a1Q00780 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.2□□□□□ -1.58
Col8a1Q00780 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col8a1Q00780 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col8a1Q00780 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a1Q00780 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.2□□□□□ -1.58
Col8a1Q00780 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col8a1Q00780 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col8a1Q00780 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col8a1Q00780 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col8a1Q00780 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm43557-201ENSMUST00000197100 2370 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col8a1Q00780 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm24273-201ENSMUST00000102332 164 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm26078-201ENSMUST00000104067 128 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm14783-201ENSMUST00000118900 663 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm13785-201ENSMUST00000119099 690 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm7670-201ENSMUST00000121272 641 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm14678-201ENSMUST00000121396 482 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm14784-201ENSMUST00000121604 663 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm14530-201ENSMUST00000122391 333 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm22277-201ENSMUST00000157204 277 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Gm24939-201ENSMUST00000158325 137 ntBASIC5.19□□□□□ -1.58
Col8a1Q00780 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col8a1Q00780 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms