Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Mir7081-201ENSMUST00000184490 75 ntBASIC3.14□□□□□ -1.91
PrkdcP97313 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.14□□□□□ -1.91
PrkdcP97313 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.14□□□□□ -1.91
PrkdcP97313 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
PrkdcP97313 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC3.14□□□□□ -1.91
PrkdcP97313 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
PrkdcP97313 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PrkdcP97313 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PrkdcP97313 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
PrkdcP97313 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PrkdcP97313 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC3.14□□□□□ -1.91
PrkdcP97313 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PrkdcP97313 Gm37304-201ENSMUST00000193833 2886 ntBASIC3.14□□□□□ -1.91
PrkdcP97313 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
PrkdcP97313 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PrkdcP97313 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Gm12982-201ENSMUST00000117408 190 ntBASIC3.14□□□□□ -1.91
PrkdcP97313 Gm22380-201ENSMUST00000157479 95 ntBASIC3.14□□□□□ -1.91
PrkdcP97313 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC3.14□□□□□ -1.91
PrkdcP97313 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC3.14□□□□□ -1.91
PrkdcP97313 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.14□□□□□ -1.91
PrkdcP97313 Gm43828-201ENSMUST00000196890 639 ntBASIC3.14□□□□□ -1.91
PrkdcP97313 Gm45628-201ENSMUST00000210849 274 ntBASIC3.14□□□□□ -1.91
PrkdcP97313 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC3.14□□□□□ -1.91
PrkdcP97313 AC159885.1-201ENSMUST00000222221 199 ntBASIC3.14□□□□□ -1.91
PrkdcP97313 Gm23736-201ENSMUST00000082553 75 ntBASIC3.14□□□□□ -1.91
PrkdcP97313 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC3.14□□□□□ -1.91
PrkdcP97313 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 AC123858.1-201ENSMUST00000226948 1874 ntBASIC3.14□□□□□ -1.91
PrkdcP97313 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PrkdcP97313 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
PrkdcP97313 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Gm37241-201ENSMUST00000191736 523 ntBASIC3.14□□□□□ -1.91
PrkdcP97313 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC3.14□□□□□ -1.91
PrkdcP97313 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Gm4928-201ENSMUST00000219622 850 ntBASIC3.14□□□□□ -1.91
PrkdcP97313 Gm18940-201ENSMUST00000222518 871 ntBASIC3.14□□□□□ -1.91
PrkdcP97313 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.14□□□□□ -1.91
PrkdcP97313 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PrkdcP97313 Gm7099-201ENSMUST00000080066 554 ntBASIC3.14□□□□□ -1.91
PrkdcP97313 n-R5s152-201ENSMUST00000093641 119 ntBASIC3.14□□□□□ -1.91
PrkdcP97313 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PrkdcP97313 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
PrkdcP97313 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
PrkdcP97313 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PrkdcP97313 Gm13172-201ENSMUST00000118685 256 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 Gm5379-201ENSMUST00000120973 826 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 Gm13132-201ENSMUST00000121194 472 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.13□□□□□ -1.91
PrkdcP97313 Gm25386-201ENSMUST00000157814 288 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PrkdcP97313 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PrkdcP97313 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.13□□□□□ -1.91
PrkdcP97313 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PrkdcP97313 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PrkdcP97313 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PrkdcP97313 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC3.13□□□□□ -1.91
PrkdcP97313 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
PrkdcP97313 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PrkdcP97313 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PrkdcP97313 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PrkdcP97313 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 Gm11200-201ENSMUST00000121698 448 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
PrkdcP97313 Gm37081-201ENSMUST00000192034 196 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 Gm37791-201ENSMUST00000195081 286 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC3.13□□□□□ -1.91
PrkdcP97313 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PrkdcP97313 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PrkdcP97313 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PrkdcP97313 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PrkdcP97313 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PrkdcP97313 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.13□□□□□ -1.91
PrkdcP97313 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PrkdcP97313 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 116.7 ms