Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm23872-201ENSMUST00000175432 77 ntBASIC6.18□□□□□ -1.42
Hmgb1P63158 Gm24969-201ENSMUST00000180331 79 ntBASIC6.18□□□□□ -1.42
Hmgb1P63158 Gm27522-201ENSMUST00000183949 230 ntBASIC6.18□□□□□ -1.42
Hmgb1P63158 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC6.18□□□□□ -1.42
Hmgb1P63158 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC6.18□□□□□ -1.42
Hmgb1P63158 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC6.18□□□□□ -1.42
Hmgb1P63158 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC6.18□□□□□ -1.42
Hmgb1P63158 Gm37336-202ENSMUST00000193705 468 ntBASIC6.18□□□□□ -1.42
Hmgb1P63158 Gm43350-201ENSMUST00000196382 711 ntBASIC6.18□□□□□ -1.42
Hmgb1P63158 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.18□□□□□ -1.42
Hmgb1P63158 Gm43214-201ENSMUST00000199242 352 ntBASIC6.18□□□□□ -1.42
Hmgb1P63158 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hmgb1P63158 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.18□□□□□ -1.42
Hmgb1P63158 Gm45596-201ENSMUST00000209279 434 ntBASIC6.18□□□□□ -1.42
Hmgb1P63158 Gm20786-201ENSMUST00000212649 436 ntBASIC6.18□□□□□ -1.42
Hmgb1P63158 AC138284.2-201ENSMUST00000213982 567 ntBASIC6.18□□□□□ -1.42
Hmgb1P63158 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC6.18□□□□□ -1.42
Hmgb1P63158 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC6.18□□□□□ -1.42
Hmgb1P63158 Gm7540-201ENSMUST00000219764 926 ntBASIC6.18□□□□□ -1.42
Hmgb1P63158 AC155922.1-201ENSMUST00000220100 373 ntBASIC6.18□□□□□ -1.42
Hmgb1P63158 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC6.18□□□□□ -1.42
Hmgb1P63158 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.18□□□□□ -1.42
Hmgb1P63158 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC6.18□□□□□ -1.42
Hmgb1P63158 AC154239.2-201ENSMUST00000227859 233 ntBASIC6.18□□□□□ -1.42
Hmgb1P63158 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb1P63158 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hmgb1P63158 Gm38101-201ENSMUST00000193484 3557 ntBASIC6.18□□□□□ -1.42
Hmgb1P63158 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC6.18□□□□□ -1.42
Hmgb1P63158 Gm7754-201ENSMUST00000223075 2064 ntBASIC6.18□□□□□ -1.42
Hmgb1P63158 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Hmgb1P63158 AC123858.1-201ENSMUST00000226948 1874 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hmgb1P63158 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm22231-201ENSMUST00000101027 73 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm7079-201ENSMUST00000119726 171 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm11387-201ENSMUST00000120266 772 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm12881-201ENSMUST00000121191 203 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm24840-201ENSMUST00000122603 147 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm23171-201ENSMUST00000157159 264 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm8161-201ENSMUST00000168739 481 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm22932-201ENSMUST00000175510 72 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm21856-201ENSMUST00000187547 696 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm19418-201ENSMUST00000197436 580 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm9560-201ENSMUST00000205012 1201 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm4083-201ENSMUST00000207158 451 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm19880-201ENSMUST00000207731 318 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm6828-201ENSMUST00000207902 1186 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC6.17□□□□□ -1.42
Hmgb1P63158 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC6.17□□□□□ -1.42
Hmgb1P63158 AC126685.1-201ENSMUST00000221001 121 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC6.17□□□□□ -1.42
Hmgb1P63158 AC155314.1-201ENSMUST00000227624 508 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm5830-201ENSMUST00000049117 443 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Mir350-201ENSMUST00000083639 99 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Hmgb1P63158 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hmgb1P63158 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Hmgb1P63158 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Gm43990-201ENSMUST00000203790 1691 ntBASIC6.17□□□□□ -1.42
Hmgb1P63158 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.17□□□□□ -1.42
Hmgb1P63158 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Hmgb1P63158 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hmgb1P63158 Gm37834-201ENSMUST00000194517 3035 ntBASIC6.16□□□□□ -1.42
Hmgb1P63158 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Hmgb1P63158 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Hmgb1P63158 Gm11406-201ENSMUST00000117418 484 ntBASIC6.16□□□□□ -1.42
Hmgb1P63158 Gm12564-201ENSMUST00000119860 321 ntBASIC6.16□□□□□ -1.42
Hmgb1P63158 Gm11909-201ENSMUST00000121424 759 ntBASIC6.16□□□□□ -1.42
Hmgb1P63158 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hmgb1P63158 Gm2182-201ENSMUST00000145243 663 ntBASIC6.16□□□□□ -1.42
Hmgb1P63158 Gm14368-201ENSMUST00000145305 415 ntBASIC6.16□□□□□ -1.42
Hmgb1P63158 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hmgb1P63158 Gm26410-201ENSMUST00000157670 261 ntBASIC6.16□□□□□ -1.42
Hmgb1P63158 Gm25439-201ENSMUST00000158280 131 ntBASIC6.16□□□□□ -1.42
Hmgb1P63158 Gm8214-201ENSMUST00000172123 351 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms