Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Fdft1P53798 Gm13250-201ENSMUST00000117209 753 ntBASIC4.72□□□□□ -1.65
Fdft1P53798 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.72□□□□□ -1.65
Fdft1P53798 Gm26373-201ENSMUST00000157833 103 ntBASIC4.72□□□□□ -1.65
Fdft1P53798 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Fdft1P53798 Gm28061-201ENSMUST00000189085 807 ntBASIC4.72□□□□□ -1.65
Fdft1P53798 Gm37631-201ENSMUST00000192275 364 ntBASIC4.72□□□□□ -1.65
Fdft1P53798 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.72□□□□□ -1.65
Fdft1P53798 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.72□□□□□ -1.65
Fdft1P53798 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Fdft1P53798 Gm19065-202ENSMUST00000203910 1165 ntBASIC4.72□□□□□ -1.65
Fdft1P53798 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC4.72□□□□□ -1.65
Fdft1P53798 Gm44277-201ENSMUST00000205128 649 ntBASIC4.72□□□□□ -1.65
Fdft1P53798 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Fdft1P53798 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.72□□□□□ -1.65
Fdft1P53798 Gm45498-201ENSMUST00000210346 283 ntBASIC4.72□□□□□ -1.65
Fdft1P53798 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Fdft1P53798 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.72□□□□□ -1.65
Fdft1P53798 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC4.72□□□□□ -1.65
Fdft1P53798 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.72□□□□□ -1.65
Fdft1P53798 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Fdft1P53798 Gm10145-201ENSMUST00000077776 462 ntBASIC4.72□□□□□ -1.65
Fdft1P53798 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Fdft1P53798 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Fdft1P53798 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Fdft1P53798 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.72□□□□□ -1.65
Fdft1P53798 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Fdft1P53798 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.72□□□□□ -1.65
Fdft1P53798 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Fdft1P53798 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Fdft1P53798 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Fdft1P53798 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Fdft1P53798 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.71□□□□□ -1.65
Fdft1P53798 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Fdft1P53798 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.71□□□□□ -1.66
Fdft1P53798 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Fdft1P53798 Fus-202ENSMUST00000079045 2623 ntBASIC4.71□□□□□ -1.66
Fdft1P53798 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Fdft1P53798 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Fdft1P53798 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.71□□□□□ -1.66
Fdft1P53798 Gm16345-201ENSMUST00000146065 158 ntBASIC4.71□□□□□ -1.66
Fdft1P53798 Gm25116-201ENSMUST00000157191 122 ntBASIC4.71□□□□□ -1.66
Fdft1P53798 Gm16378-201ENSMUST00000179168 342 ntBASIC4.71□□□□□ -1.66
Fdft1P53798 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC4.71□□□□□ -1.66
Fdft1P53798 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Fdft1P53798 Gm8502-201ENSMUST00000185708 901 ntBASIC4.71□□□□□ -1.66
Fdft1P53798 Gm21147-201ENSMUST00000186046 913 ntBASIC4.71□□□□□ -1.66
Fdft1P53798 Gm5511-201ENSMUST00000189380 802 ntBASIC4.71□□□□□ -1.66
Fdft1P53798 Gm37908-201ENSMUST00000195828 470 ntBASIC4.71□□□□□ -1.66
Fdft1P53798 Gm8891-201ENSMUST00000198546 832 ntBASIC4.71□□□□□ -1.66
Fdft1P53798 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.71□□□□□ -1.66
Fdft1P53798 Gm19201-201ENSMUST00000210127 778 ntBASIC4.71□□□□□ -1.66
Fdft1P53798 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Fdft1P53798 AC131745.2-201ENSMUST00000225736 565 ntBASIC4.71□□□□□ -1.66
Fdft1P53798 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.71□□□□□ -1.66
Fdft1P53798 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.71□□□□□ -1.66
Fdft1P53798 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Fdft1P53798 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Fdft1P53798 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Fdft1P53798 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Fdft1P53798 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Fdft1P53798 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Fdft1P53798 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Fdft1P53798 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Fdft1P53798 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Fdft1P53798 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Fdft1P53798 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Fdft1P53798 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.71□□□□□ -1.66
Fdft1P53798 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Fdft1P53798 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Fdft1P53798 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Fdft1P53798 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.71□□□□□ -1.66
Fdft1P53798 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Fdft1P53798 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.7□□□□□ -1.66
Fdft1P53798 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Fdft1P53798 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Fdft1P53798 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.7□□□□□ -1.66
Fdft1P53798 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Fdft1P53798 Gm43845-201ENSMUST00000202462 1820 ntBASIC4.7□□□□□ -1.66
Fdft1P53798 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Fdft1P53798 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Fdft1P53798 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.7□□□□□ -1.66
Fdft1P53798 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Fdft1P53798 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Fdft1P53798 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Fdft1P53798 Gm8145-201ENSMUST00000118220 745 ntBASIC4.7□□□□□ -1.66
Fdft1P53798 Gm16106-201ENSMUST00000119187 294 ntBASIC4.7□□□□□ -1.66
Fdft1P53798 Gm12893-201ENSMUST00000121732 275 ntBASIC4.7□□□□□ -1.66
Fdft1P53798 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Fdft1P53798 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Fdft1P53798 Gm25179-201ENSMUST00000122632 128 ntBASIC4.7□□□□□ -1.66
Fdft1P53798 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.7□□□□□ -1.66
Fdft1P53798 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.7□□□□□ -1.66
Fdft1P53798 Gm23327-201ENSMUST00000157420 78 ntBASIC4.7□□□□□ -1.66
Fdft1P53798 Gm26153-201ENSMUST00000157433 127 ntBASIC4.7□□□□□ -1.66
Fdft1P53798 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Fdft1P53798 Gm4617-201ENSMUST00000178993 331 ntBASIC4.7□□□□□ -1.66
Fdft1P53798 Mir7235-201ENSMUST00000183796 56 ntBASIC4.7□□□□□ -1.66
Fdft1P53798 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Fdft1P53798 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms