Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm38284-201ENSMUST00000194803 4539 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 AC130827.1-201ENSMUST00000220476 3850 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rfx1P48377 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Rfx1P48377 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Rfx1P48377 Gm24430-201ENSMUST00000104077 104 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rfx1P48377 Igkv13-87-201ENSMUST00000114214 286 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Gm25507-201ENSMUST00000116981 144 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
Rfx1P48377 Gm15266-201ENSMUST00000119635 255 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Gm13170-201ENSMUST00000119716 643 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Gm11533-201ENSMUST00000120287 477 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Gm12332-201ENSMUST00000121397 922 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Gm14766-201ENSMUST00000121689 367 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Gm14411-201ENSMUST00000121798 914 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC7.04□□□□□ -1.28
Rfx1P48377 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC7.04□□□□□ -1.28
Rfx1P48377 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Rfx1P48377 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC7.04□□□□□ -1.28
Rfx1P48377 Mup-ps2-201ENSMUST00000142602 533 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rfx1P48377 Gm25667-201ENSMUST00000157701 275 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Gm26162-201ENSMUST00000157793 132 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Gm26353-201ENSMUST00000158224 255 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Gm28080-201ENSMUST00000188552 722 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Gm43015-201ENSMUST00000199087 565 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC7.04□□□□□ -1.28
Rfx1P48377 Gm44538-201ENSMUST00000205615 348 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Gm45690-201ENSMUST00000210775 246 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Gm18774-201ENSMUST00000218269 601 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rfx1P48377 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rfx1P48377 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
Rfx1P48377 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Rfx1P48377 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rfx1P48377 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rfx1P48377 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Rfx1P48377 Mir138-1-201ENSMUST00000083480 99 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rfx1P48377 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rfx1P48377 Gm37509-201ENSMUST00000194867 3169 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Rfx1P48377 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rfx1P48377 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rfx1P48377 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Rfx1P48377 Gm38198-201ENSMUST00000191772 3581 ntBASIC7.04□□□□□ -1.28
Rfx1P48377 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Rfx1P48377 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Rfx1P48377 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Rfx1P48377 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Rfx1P48377 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Gm45311-201ENSMUST00000211086 1330 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Rfx1P48377 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Rfx1P48377 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Rfx1P48377 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC7.03□□□□□ -1.28
Rfx1P48377 Gm15786-201ENSMUST00000121079 450 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Gm23888-201ENSMUST00000122690 253 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Gm24628-201ENSMUST00000122761 289 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Rfx1P48377 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Rfx1P48377 Mir1960-201ENSMUST00000157488 78 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Gm25374-201ENSMUST00000158158 101 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC7.03□□□□□ -1.28
Rfx1P48377 Gm24103-201ENSMUST00000174930 77 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Rfx1P48377 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Rfx1P48377 Gm28492-201ENSMUST00000190899 1019 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Gm43779-201ENSMUST00000196691 829 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Trav15d-3-201ENSMUST00000198604 167 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Gm43849-201ENSMUST00000201086 215 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Gm5990-201ENSMUST00000203126 746 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC7.03□□□□□ -1.28
Rfx1P48377 Gm33626-201ENSMUST00000206790 828 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 AC161520.1-201ENSMUST00000210954 939 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Gm8189-203ENSMUST00000211159 1225 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC7.03□□□□□ -1.28
Rfx1P48377 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 AC079644.2-201ENSMUST00000220581 322 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Gm46312-201ENSMUST00000220961 420 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC7.03□□□□□ -1.28
Rfx1P48377 AC160980.2-201ENSMUST00000225131 949 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 CT572983.1-201ENSMUST00000226895 514 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Glycam1-204ENSMUST00000228895 641 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Rfx1P48377 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Rfx1P48377 Gm24200-201ENSMUST00000082955 157 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 n-R5s79-201ENSMUST00000083071 120 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Rfx1P48377 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Rfx1P48377 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC7.03□□□□□ -1.28
Rfx1P48377 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Rfx1P48377 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms