Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC4.59□□□□□ -1.67
Cdx2P43241 Gm43370-201ENSMUST00000196437 284 ntBASIC4.59□□□□□ -1.67
Cdx2P43241 Gm8874-201ENSMUST00000196826 286 ntBASIC4.59□□□□□ -1.67
Cdx2P43241 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx2P43241 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC4.59□□□□□ -1.67
Cdx2P43241 Gm4574-201ENSMUST00000207804 542 ntBASIC4.59□□□□□ -1.67
Cdx2P43241 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC4.59□□□□□ -1.67
Cdx2P43241 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Cdx2P43241 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.59□□□□□ -1.67
Cdx2P43241 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.59□□□□□ -1.67
Cdx2P43241 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.59□□□□□ -1.67
Cdx2P43241 AC154738.4-201ENSMUST00000228310 414 ntBASIC4.59□□□□□ -1.67
Cdx2P43241 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx2P43241 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx2P43241 Gm23464-201ENSMUST00000083145 147 ntBASIC4.59□□□□□ -1.67
Cdx2P43241 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Cdx2P43241 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
Cdx2P43241 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Cdx2P43241 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
Cdx2P43241 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Cdx2P43241 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cdx2P43241 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.58□□□□□ -1.68
Cdx2P43241 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.58□□□□□ -1.68
Cdx2P43241 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Cdx2P43241 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Cdx2P43241 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC4.58□□□□□ -1.68
Cdx2P43241 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.58□□□□□ -1.68
Cdx2P43241 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cdx2P43241 Gm5715-201ENSMUST00000196854 1465 ntBASIC4.58□□□□□ -1.68
Cdx2P43241 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Cdx2P43241 Gm9308-201ENSMUST00000119073 448 ntBASIC4.58□□□□□ -1.68
Cdx2P43241 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.58□□□□□ -1.68
Cdx2P43241 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.58□□□□□ -1.68
Cdx2P43241 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Cdx2P43241 Gm25861-201ENSMUST00000158251 109 ntBASIC4.58□□□□□ -1.68
Cdx2P43241 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Cdx2P43241 Gm4854-201ENSMUST00000185902 574 ntBASIC4.58□□□□□ -1.68
Cdx2P43241 Gm28660-201ENSMUST00000186496 253 ntBASIC4.58□□□□□ -1.68
Cdx2P43241 Gm28859-201ENSMUST00000186650 616 ntBASIC4.58□□□□□ -1.68
Cdx2P43241 Gm43441-201ENSMUST00000201458 205 ntBASIC4.58□□□□□ -1.68
Cdx2P43241 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC4.58□□□□□ -1.68
Cdx2P43241 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.58□□□□□ -1.68
Cdx2P43241 Gm5339-201ENSMUST00000210551 1102 ntBASIC4.58□□□□□ -1.68
Cdx2P43241 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC4.58□□□□□ -1.68
Cdx2P43241 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.58□□□□□ -1.68
Cdx2P43241 AC169985.1-201ENSMUST00000223648 2439 ntBASIC4.58□□□□□ -1.68
Cdx2P43241 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cdx2P43241 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Cdx2P43241 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
Cdx2P43241 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC4.58□□□□□ -1.68
Cdx2P43241 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Cdx2P43241 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
Cdx2P43241 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx2P43241 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx2P43241 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx2P43241 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx2P43241 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx2P43241 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx2P43241 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx2P43241 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Cdx2P43241 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx2P43241 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.57□□□□□ -1.68
Cdx2P43241 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Cdx2P43241 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx2P43241 Gm43831-201ENSMUST00000200461 2598 ntBASIC4.57□□□□□ -1.68
Cdx2P43241 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Cdx2P43241 Gm11878-201ENSMUST00000117908 400 ntBASIC4.57□□□□□ -1.68
Cdx2P43241 Gm12039-201ENSMUST00000118219 180 ntBASIC4.57□□□□□ -1.68
Cdx2P43241 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.57□□□□□ -1.68
Cdx2P43241 Gm12852-201ENSMUST00000119478 719 ntBASIC4.57□□□□□ -1.68
Cdx2P43241 Gm11484-201ENSMUST00000119808 338 ntBASIC4.57□□□□□ -1.68
Cdx2P43241 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.57□□□□□ -1.68
Cdx2P43241 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Cdx2P43241 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC4.57□□□□□ -1.68
Cdx2P43241 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx2P43241 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx2P43241 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.57□□□□□ -1.68
Cdx2P43241 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx2P43241 Gm37492-201ENSMUST00000191948 376 ntBASIC4.57□□□□□ -1.68
Cdx2P43241 Gm8823-201ENSMUST00000193158 433 ntBASIC4.57□□□□□ -1.68
Cdx2P43241 Ighv10-4-201ENSMUST00000193702 299 ntBASIC4.57□□□□□ -1.68
Cdx2P43241 AC121804.1-201ENSMUST00000221016 394 ntBASIC4.57□□□□□ -1.68
Cdx2P43241 AC192616.2-201ENSMUST00000221482 3841 ntBASIC4.57□□□□□ -1.68
Cdx2P43241 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.57□□□□□ -1.68
Cdx2P43241 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Cdx2P43241 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Cdx2P43241 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Cdx2P43241 AC154627.2-201ENSMUST00000227028 4669 ntBASIC4.57□□□□□ -1.68
Cdx2P43241 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.57□□□□□ -1.68
Cdx2P43241 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.57□□□□□ -1.68
Cdx2P43241 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx2P43241 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Cdx2P43241 AC153532.2-201ENSMUST00000219753 3844 ntBASIC4.57□□□□□ -1.68
Cdx2P43241 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Cdx2P43241 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Cdx2P43241 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC4.57□□□□□ -1.68
Cdx2P43241 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdx2P43241 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdx2P43241 AC168056.3-201ENSMUST00000225395 2540 ntBASIC4.56□□□□□ -1.68
Cdx2P43241 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms