Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lire1P11260 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lire1P11260 Gm44288-201ENSMUST00000205061 2795 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lire1P11260 Gm25595-201ENSMUST00000102273 97 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Lipe-203ENSMUST00000105177 1251 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm14706-201ENSMUST00000117744 255 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm9078-201ENSMUST00000119126 617 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm12281-201ENSMUST00000119536 298 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm12110-201ENSMUST00000121601 579 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC5.08□□□□□ -1.6
Lire1P11260 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lire1P11260 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lire1P11260 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lire1P11260 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lire1P11260 Gm23585-201ENSMUST00000157656 102 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm17177-201ENSMUST00000169144 483 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lire1P11260 Gm20526-201ENSMUST00000173416 158 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC5.08□□□□□ -1.6
Lire1P11260 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lire1P11260 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lire1P11260 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lire1P11260 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lire1P11260 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lire1P11260 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lire1P11260 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lire1P11260 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lire1P11260 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lire1P11260 Gm21232-201ENSMUST00000182187 1006 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm28596-201ENSMUST00000185870 696 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.08□□□□□ -1.6
Lire1P11260 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.08□□□□□ -1.6
Lire1P11260 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm32295-201ENSMUST00000192558 696 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm31260-201ENSMUST00000193478 696 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm5842-201ENSMUST00000195073 622 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm18985-201ENSMUST00000196472 1079 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.08□□□□□ -1.6
Lire1P11260 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.08□□□□□ -1.6
Lire1P11260 Gm36247-201ENSMUST00000211834 285 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lire1P11260 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Lire1P11260 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Lire1P11260 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.08□□□□□ -1.6
Lire1P11260 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm24029-201ENSMUST00000083928 143 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Mir504-201ENSMUST00000093602 79 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Lire1P11260 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Lire1P11260 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lire1P11260 AC132336.1-201ENSMUST00000222844 1740 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Lire1P11260 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Lire1P11260 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Lire1P11260 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lire1P11260 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.07□□□□□ -1.6
Lire1P11260 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lire1P11260 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC5.07□□□□□ -1.6
Lire1P11260 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Lire1P11260 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lire1P11260 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lire1P11260 Gm23942-201ENSMUST00000101956 107 ntBASIC5.07□□□□□ -1.6
Lire1P11260 Gm24789-201ENSMUST00000104282 131 ntBASIC5.07□□□□□ -1.6
Lire1P11260 Gm22499-201ENSMUST00000104501 135 ntBASIC5.07□□□□□ -1.6
Lire1P11260 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.07□□□□□ -1.6
Lire1P11260 Gm6134-201ENSMUST00000117265 171 ntBASIC5.07□□□□□ -1.6
Lire1P11260 Gm11908-201ENSMUST00000117755 347 ntBASIC5.07□□□□□ -1.6
Lire1P11260 Gm14082-201ENSMUST00000118582 801 ntBASIC5.07□□□□□ -1.6
Lire1P11260 Gm15877-201ENSMUST00000121897 964 ntBASIC5.07□□□□□ -1.6
Lire1P11260 Gm13738-201ENSMUST00000122437 469 ntBASIC5.07□□□□□ -1.6
Lire1P11260 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Lire1P11260 Gm26172-201ENSMUST00000158421 134 ntBASIC5.07□□□□□ -1.6
Lire1P11260 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.07□□□□□ -1.6
Lire1P11260 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Lire1P11260 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Lire1P11260 Gm20453-201ENSMUST00000173968 226 ntBASIC5.07□□□□□ -1.6
Lire1P11260 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Lire1P11260 Gm22650-201ENSMUST00000175138 105 ntBASIC5.07□□□□□ -1.6
Lire1P11260 Gm22122-201ENSMUST00000175147 200 ntBASIC5.07□□□□□ -1.6
Lire1P11260 Gm3307-201ENSMUST00000176164 632 ntBASIC5.07□□□□□ -1.6
Lire1P11260 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Lire1P11260 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Lire1P11260 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC5.07□□□□□ -1.6
Lire1P11260 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.07□□□□□ -1.6
Lire1P11260 Gm18969-201ENSMUST00000189423 730 ntBASIC5.07□□□□□ -1.6
Lire1P11260 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC5.07□□□□□ -1.6
Lire1P11260 Gm37908-201ENSMUST00000195828 470 ntBASIC5.07□□□□□ -1.6
Lire1P11260 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.07□□□□□ -1.6
Lire1P11260 Gm9332-201ENSMUST00000198431 730 ntBASIC5.07□□□□□ -1.6
Lire1P11260 Gm38670-201ENSMUST00000199248 77 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms