Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TnfP06804 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TnfP06804 Gm13491-201ENSMUST00000118267 235 ntBASIC5.03□□□□□ -1.6
TnfP06804 Gm15333-201ENSMUST00000118825 364 ntBASIC5.03□□□□□ -1.6
TnfP06804 Gm15745-201ENSMUST00000119807 115 ntBASIC5.03□□□□□ -1.6
TnfP06804 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.03□□□□□ -1.6
TnfP06804 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC5.03□□□□□ -1.6
TnfP06804 Gm24774-201ENSMUST00000157384 134 ntBASIC5.03□□□□□ -1.6
TnfP06804 Gm20954-201ENSMUST00000189078 644 ntBASIC5.03□□□□□ -1.6
TnfP06804 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.03□□□□□ -1.6
TnfP06804 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.03□□□□□ -1.6
TnfP06804 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC5.03□□□□□ -1.6
TnfP06804 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.03□□□□□ -1.6
TnfP06804 Gm18258-201ENSMUST00000210413 542 ntBASIC5.03□□□□□ -1.6
TnfP06804 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TnfP06804 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC5.03□□□□□ -1.6
TnfP06804 Gm19095-201ENSMUST00000220533 730 ntBASIC5.03□□□□□ -1.6
TnfP06804 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.03□□□□□ -1.6
TnfP06804 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TnfP06804 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TnfP06804 Gm25147-201ENSMUST00000083030 105 ntBASIC5.03□□□□□ -1.6
TnfP06804 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TnfP06804 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
TnfP06804 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TnfP06804 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.03□□□□□ -1.6
TnfP06804 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.03□□□□□ -1.6
TnfP06804 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TnfP06804 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TnfP06804 Gm38264-201ENSMUST00000194850 2032 ntBASIC5.02□□□□□ -1.61
TnfP06804 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TnfP06804 Gm43528-201ENSMUST00000199492 1674 ntBASIC5.02□□□□□ -1.61
TnfP06804 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TnfP06804 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TnfP06804 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
TnfP06804 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TnfP06804 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TnfP06804 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TnfP06804 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TnfP06804 Gm22657-201ENSMUST00000104197 132 ntBASIC5.02□□□□□ -1.61
TnfP06804 Mir879-201ENSMUST00000104703 76 ntBASIC5.02□□□□□ -1.61
TnfP06804 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TnfP06804 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TnfP06804 Gm15779-201ENSMUST00000117470 412 ntBASIC5.02□□□□□ -1.61
TnfP06804 Gm13932-201ENSMUST00000120873 610 ntBASIC5.02□□□□□ -1.61
TnfP06804 n-R5s30-201ENSMUST00000122624 122 ntBASIC5.02□□□□□ -1.61
TnfP06804 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC5.02□□□□□ -1.61
TnfP06804 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TnfP06804 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.02□□□□□ -1.61
TnfP06804 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.02□□□□□ -1.61
TnfP06804 Zakit-201ENSMUST00000157677 308 ntBASIC5.02□□□□□ -1.61
TnfP06804 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC5.02□□□□□ -1.61
TnfP06804 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TnfP06804 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.02□□□□□ -1.61
TnfP06804 Gm3912-203ENSMUST00000211024 367 ntBASIC5.02□□□□□ -1.61
TnfP06804 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.02□□□□□ -1.61
TnfP06804 Gm6988-201ENSMUST00000222676 375 ntBASIC5.02□□□□□ -1.61
TnfP06804 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.02□□□□□ -1.61
TnfP06804 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.02□□□□□ -1.61
TnfP06804 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
TnfP06804 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TnfP06804 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TnfP06804 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
TnfP06804 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TnfP06804 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
TnfP06804 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.02□□□□□ -1.61
TnfP06804 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TnfP06804 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.01□□□□□ -1.61
TnfP06804 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.01□□□□□ -1.61
TnfP06804 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TnfP06804 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
TnfP06804 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TnfP06804 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TnfP06804 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
TnfP06804 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
TnfP06804 Gm14878-201ENSMUST00000118167 293 ntBASIC5.01□□□□□ -1.61
TnfP06804 Gm12820-201ENSMUST00000119233 342 ntBASIC5.01□□□□□ -1.61
TnfP06804 Gm12332-201ENSMUST00000121397 922 ntBASIC5.01□□□□□ -1.61
TnfP06804 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TnfP06804 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.01□□□□□ -1.61
TnfP06804 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TnfP06804 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.01□□□□□ -1.61
TnfP06804 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC5.01□□□□□ -1.61
TnfP06804 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TnfP06804 Gm21959-201ENSMUST00000178439 452 ntBASIC5.01□□□□□ -1.61
TnfP06804 Gm4842-201ENSMUST00000183237 835 ntBASIC5.01□□□□□ -1.61
TnfP06804 Gm3145-201ENSMUST00000188584 220 ntBASIC5.01□□□□□ -1.61
TnfP06804 Gm18181-201ENSMUST00000190670 736 ntBASIC5.01□□□□□ -1.61
TnfP06804 Gm37632-201ENSMUST00000191811 1142 ntBASIC5.01□□□□□ -1.61
TnfP06804 Gm37209-201ENSMUST00000194109 1276 ntBASIC5.01□□□□□ -1.61
TnfP06804 Gm44474-201ENSMUST00000196525 127 ntBASIC5.01□□□□□ -1.61
TnfP06804 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TnfP06804 Gm22897-202ENSMUST00000197782 127 ntBASIC5.01□□□□□ -1.61
TnfP06804 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.01□□□□□ -1.61
TnfP06804 Gm45857-201ENSMUST00000212207 356 ntBASIC5.01□□□□□ -1.61
TnfP06804 Gm46327-201ENSMUST00000218240 365 ntBASIC5.01□□□□□ -1.61
TnfP06804 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.01□□□□□ -1.61
TnfP06804 n-R5s152-201ENSMUST00000093641 119 ntBASIC5.01□□□□□ -1.61
TnfP06804 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.01□□□□□ -1.61
TnfP06804 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.01□□□□□ -1.61
TnfP06804 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms