Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Hmgb3O54879 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hmgb3O54879 Gm13477-201ENSMUST00000121620 2687 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC3.8□□□□□ -1.8
Hmgb3O54879 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Hmgb3O54879 AC113059.2-201ENSMUST00000213462 3016 ntBASIC3.8□□□□□ -1.8
Hmgb3O54879 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Hmgb3O54879 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hmgb3O54879 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Hmgb3O54879 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC3.79□□□□□ -1.8
Hmgb3O54879 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Hmgb3O54879 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmgb3O54879 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmgb3O54879 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmgb3O54879 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmgb3O54879 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Hmgb3O54879 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Hmgb3O54879 Hm629797-201ENSMUST00000183645 2398 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm4596-201ENSMUST00000117197 442 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm11877-201ENSMUST00000118921 852 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm15959-201ENSMUST00000121724 368 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm11759-201ENSMUST00000121742 464 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Hmgb3O54879 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Hmgb3O54879 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm22378-201ENSMUST00000157481 111 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm24687-201ENSMUST00000157758 241 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm22859-201ENSMUST00000174978 122 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm38181-201ENSMUST00000181357 720 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Hmgb3O54879 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm37741-201ENSMUST00000191768 1256 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm33952-201ENSMUST00000197795 408 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm9173-201ENSMUST00000198054 400 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm19617-201ENSMUST00000202977 308 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm44648-201ENSMUST00000208267 329 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm21112-201ENSMUST00000212224 578 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm7760-201ENSMUST00000212265 578 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm7807-201ENSMUST00000212475 578 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm45789-201ENSMUST00000213038 364 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC3.79□□□□□ -1.8
Hmgb3O54879 AC105169.1-201ENSMUST00000218912 1294 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Thoc7-209ENSMUST00000225325 765 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Hmgb3O54879 AC133517.2-201ENSMUST00000226820 690 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 AC127371.1-201ENSMUST00000228516 312 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Hmgb3O54879 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Hmgb3O54879 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Hmgb3O54879 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Hmgb3O54879 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Gm37831-201ENSMUST00000191685 1787 ntBASIC3.79□□□□□ -1.8
Hmgb3O54879 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hmgb3O54879 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Hmgb3O54879 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm37789-201ENSMUST00000192862 2889 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.78□□□□□ -1.8
Hmgb3O54879 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm42598-201ENSMUST00000200110 2437 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Hmgb3O54879 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm13867-201ENSMUST00000120844 395 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm24636-201ENSMUST00000158673 288 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm17142-201ENSMUST00000164933 645 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm17060-201ENSMUST00000172394 824 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm24561-201ENSMUST00000175182 95 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm25246-201ENSMUST00000175476 69 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm27160-201ENSMUST00000184837 199 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm27653-201ENSMUST00000185037 136 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm29097-201ENSMUST00000190273 422 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm9480-201ENSMUST00000198038 616 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Hmgb3O54879 AC133189.1-201ENSMUST00000198820 140 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm4714-201ENSMUST00000203395 279 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm43892-201ENSMUST00000204373 265 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm19170-201ENSMUST00000212440 1084 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Gm46138-201ENSMUST00000215294 426 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Hmgb3O54879 AC131745.1-201ENSMUST00000223660 330 ntBASIC3.78□□□□□ -1.8
Hmgb3O54879 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Hmgb3O54879 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms