Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC3.94□□□□□ -1.78
Col6a4A2AX52 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col6a4A2AX52 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col6a4A2AX52 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC3.94□□□□□ -1.78
Col6a4A2AX52 Gm43990-201ENSMUST00000203790 1691 ntBASIC3.94□□□□□ -1.78
Col6a4A2AX52 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Col6a4A2AX52 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Col6a4A2AX52 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm37606-201ENSMUST00000191816 3116 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm33378-201ENSMUST00000219831 2758 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm42645-201ENSMUST00000201573 1627 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm37531-201ENSMUST00000191628 5415 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm22473-201ENSMUST00000104114 132 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm6071-201ENSMUST00000119561 440 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm14845-201ENSMUST00000121259 306 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm12041-201ENSMUST00000121606 602 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm18802-201ENSMUST00000186270 888 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm5244-202ENSMUST00000189517 743 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm5374-202ENSMUST00000222910 314 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
Col6a4A2AX52 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm43654-201ENSMUST00000200664 3417 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm42704-201ENSMUST00000196875 1778 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 AC144772.1-201ENSMUST00000226372 2398 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col6a4A2AX52 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm15923-201ENSMUST00000119300 1169 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Defa-ps14-201ENSMUST00000121373 418 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm12752-201ENSMUST00000121657 811 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm25999-201ENSMUST00000175398 133 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm11394-201ENSMUST00000181421 517 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm27773-201ENSMUST00000184087 78 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm27414-201ENSMUST00000185033 381 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Gm45226-201ENSMUST00000206602 288 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col6a4A2AX52 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 AC154335.2-201ENSMUST00000225916 638 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col6a4A2AX52 Mir193a-201ENSMUST00000083461 66 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Col6a4A2AX52 AC124556.1-201ENSMUST00000218256 1319 ntBASIC3.93□□□□□ -1.78
Col6a4A2AX52 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Col6a4A2AX52 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC3.92□□□□□ -1.78
Col6a4A2AX52 Gm37964-201ENSMUST00000192459 4905 ntBASIC3.92□□□□□ -1.78
Col6a4A2AX52 AC153494.1-201ENSMUST00000218664 3041 ntBASIC3.92□□□□□ -1.78
Col6a4A2AX52 Gm26075-201ENSMUST00000104062 121 ntBASIC3.92□□□□□ -1.78
Col6a4A2AX52 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC3.92□□□□□ -1.78
Col6a4A2AX52 Gm5757-201ENSMUST00000117494 528 ntBASIC3.92□□□□□ -1.78
Col6a4A2AX52 Gm11369-201ENSMUST00000120812 318 ntBASIC3.92□□□□□ -1.78
Col6a4A2AX52 Gm12486-201ENSMUST00000120887 541 ntBASIC3.92□□□□□ -1.78
Col6a4A2AX52 Gm27695-201ENSMUST00000184301 91 ntBASIC3.92□□□□□ -1.78
Col6a4A2AX52 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC3.92□□□□□ -1.78
Col6a4A2AX52 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col6a4A2AX52 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col6a4A2AX52 Gm18426-201ENSMUST00000191874 973 ntBASIC3.92□□□□□ -1.78
Col6a4A2AX52 Gm6546-201ENSMUST00000192096 766 ntBASIC3.92□□□□□ -1.78
Col6a4A2AX52 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC3.92□□□□□ -1.78
Col6a4A2AX52 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC3.92□□□□□ -1.78
Col6a4A2AX52 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC3.92□□□□□ -1.78
Col6a4A2AX52 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col6a4A2AX52 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col6a4A2AX52 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col6a4A2AX52 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Col6a4A2AX52 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC3.92□□□□□ -1.78
Col6a4A2AX52 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Col6a4A2AX52 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col6a4A2AX52 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col6a4A2AX52 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC3.92□□□□□ -1.78
Col6a4A2AX52 Gm37541-201ENSMUST00000192464 2315 ntBASIC3.92□□□□□ -1.78
Col6a4A2AX52 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col6a4A2AX52 Gm42955-201ENSMUST00000197355 3393 ntBASIC3.92□□□□□ -1.78
Col6a4A2AX52 Gm16463-201ENSMUST00000120527 721 ntBASIC3.92□□□□□ -1.78
Col6a4A2AX52 Gm15038-201ENSMUST00000122144 296 ntBASIC3.92□□□□□ -1.78
Col6a4A2AX52 Gm10444-201ENSMUST00000126708 148 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms