Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Scn3aA2ASI5 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scn3aA2ASI5 AC122305.2-201ENSMUST00000215148 834 ntBASIC5.18□□□□□ -1.58
Scn3aA2ASI5 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Gm10115-201ENSMUST00000076071 1228 ntBASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Gm23928-201ENSMUST00000082469 145 ntBASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Mir383-201ENSMUST00000083523 70 ntBASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Gm43990-201ENSMUST00000203790 1691 ntBASIC5.18□□□□□ -1.58
Scn3aA2ASI5 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC5.18□□□□□ -1.58
Scn3aA2ASI5 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Gm14587-201ENSMUST00000121714 658 ntBASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Gm22211-201ENSMUST00000158097 156 ntBASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Gm9560-201ENSMUST00000205012 1201 ntBASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Scn3aA2ASI5 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Gm45697-201ENSMUST00000212893 2876 ntBASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Gm28859-201ENSMUST00000186650 616 ntBASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Gm29479-201ENSMUST00000190352 455 ntBASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Ighv10-4-201ENSMUST00000193702 299 ntBASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Gm45081-201ENSMUST00000206281 572 ntBASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC5.17□□□□□ -1.58
Scn3aA2ASI5 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Gm7269-201ENSMUST00000210819 1373 ntBASIC5.17□□□□□ -1.58
Scn3aA2ASI5 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Mir3620-201ENSMUST00000184710 61 ntBASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Gm37682-201ENSMUST00000191776 522 ntBASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Scn3aA2ASI5 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Gm6261-201ENSMUST00000204707 760 ntBASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Gm18462-201ENSMUST00000208112 417 ntBASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Gm45434-201ENSMUST00000210550 293 ntBASIC5.16□□□□□ -1.58
Scn3aA2ASI5 AC154239.2-201ENSMUST00000227859 233 ntBASIC5.16□□□□□ -1.58
Scn3aA2ASI5 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Scn3aA2ASI5 n-R5s162-201ENSMUST00000082581 119 ntBASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Scn3aA2ASI5 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Scn3aA2ASI5 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.15□□□□□ -1.58
Scn3aA2ASI5 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.15□□□□□ -1.58
Scn3aA2ASI5 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Scn3aA2ASI5 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Scn3aA2ASI5 Gm22473-201ENSMUST00000104114 132 ntBASIC5.15□□□□□ -1.58
Scn3aA2ASI5 Gm15385-201ENSMUST00000118725 667 ntBASIC5.15□□□□□ -1.58
Scn3aA2ASI5 Gm10444-201ENSMUST00000126708 148 ntBASIC5.15□□□□□ -1.58
Scn3aA2ASI5 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Scn3aA2ASI5 Mir7222-201ENSMUST00000183740 75 ntBASIC5.15□□□□□ -1.58
Scn3aA2ASI5 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.15□□□□□ -1.58
Scn3aA2ASI5 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.15□□□□□ -1.58
Scn3aA2ASI5 Gm43580-201ENSMUST00000202892 284 ntBASIC5.15□□□□□ -1.58
Scn3aA2ASI5 Gm44261-201ENSMUST00000203337 209 ntBASIC5.15□□□□□ -1.58
Scn3aA2ASI5 Gm2059-201ENSMUST00000212025 287 ntBASIC5.15□□□□□ -1.58
Scn3aA2ASI5 AC153526.4-201ENSMUST00000217713 379 ntBASIC5.15□□□□□ -1.58
Scn3aA2ASI5 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Scn3aA2ASI5 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms