Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
PdfS4R2K0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PdfS4R2K0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PdfS4R2K0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
PdfS4R2K0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.54□□□□□ -0.24
PdfS4R2K0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.54□□□□□ -0.24
PdfS4R2K0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PdfS4R2K0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
PdfS4R2K0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PdfS4R2K0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PdfS4R2K0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PdfS4R2K0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PdfS4R2K0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
PdfS4R2K0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
PdfS4R2K0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PdfS4R2K0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PdfS4R2K0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
PdfS4R2K0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PdfS4R2K0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PdfS4R2K0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PdfS4R2K0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PdfS4R2K0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PdfS4R2K0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PdfS4R2K0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
PdfS4R2K0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PdfS4R2K0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PdfS4R2K0 Gm40848-201ENSMUST00000221998 324 ntBASIC13.53□□□□□ -0.24
PdfS4R2K0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PdfS4R2K0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PdfS4R2K0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PdfS4R2K0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
PdfS4R2K0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PdfS4R2K0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
PdfS4R2K0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PdfS4R2K0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PdfS4R2K0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PdfS4R2K0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
PdfS4R2K0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
PdfS4R2K0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
PdfS4R2K0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
PdfS4R2K0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PdfS4R2K0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
PdfS4R2K0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
PdfS4R2K0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.52□□□□□ -0.25
PdfS4R2K0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PdfS4R2K0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PdfS4R2K0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
PdfS4R2K0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PdfS4R2K0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PdfS4R2K0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
PdfS4R2K0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
PdfS4R2K0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.52□□□□□ -0.25
PdfS4R2K0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.52□□□□□ -0.25
PdfS4R2K0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PdfS4R2K0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdfS4R2K0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdfS4R2K0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdfS4R2K0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.51□□□□□ -0.25
PdfS4R2K0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdfS4R2K0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
PdfS4R2K0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdfS4R2K0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdfS4R2K0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdfS4R2K0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdfS4R2K0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdfS4R2K0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdfS4R2K0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdfS4R2K0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdfS4R2K0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.51□□□□□ -0.25
PdfS4R2K0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdfS4R2K0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdfS4R2K0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PdfS4R2K0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
PdfS4R2K0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PdfS4R2K0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.5□□□□□ -0.25
PdfS4R2K0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.5□□□□□ -0.25
PdfS4R2K0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.5□□□□□ -0.25
PdfS4R2K0 Gm27801-201ENSMUST00000184174 223 ntBASIC13.5□□□□□ -0.25
PdfS4R2K0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.5□□□□□ -0.25
PdfS4R2K0 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.5□□□□□ -0.25
PdfS4R2K0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.5□□□□□ -0.25
PdfS4R2K0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms