Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn8aQ9WTU3 Gm17661-201ENSMUST00000170317 270 ntBASIC17.81■□□□□ 0.44
Scn8aQ9WTU3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.81■□□□□ 0.44
Scn8aQ9WTU3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn8aQ9WTU3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn8aQ9WTU3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn8aQ9WTU3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn8aQ9WTU3 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.81■□□□□ 0.44
Scn8aQ9WTU3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn8aQ9WTU3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Scn8aQ9WTU3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn8aQ9WTU3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn8aQ9WTU3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.8■□□□□ 0.44
Scn8aQ9WTU3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn8aQ9WTU3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn8aQ9WTU3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn8aQ9WTU3 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.8■□□□□ 0.44
Scn8aQ9WTU3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn8aQ9WTU3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn8aQ9WTU3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Scn8aQ9WTU3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn8aQ9WTU3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn8aQ9WTU3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn8aQ9WTU3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn8aQ9WTU3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn8aQ9WTU3 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.79■□□□□ 0.44
Scn8aQ9WTU3 Gm9987-201ENSMUST00000069768 567 ntBASIC17.79■□□□□ 0.44
Scn8aQ9WTU3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn8aQ9WTU3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn8aQ9WTU3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn8aQ9WTU3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn8aQ9WTU3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Scn8aQ9WTU3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn8aQ9WTU3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn8aQ9WTU3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn8aQ9WTU3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn8aQ9WTU3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn8aQ9WTU3 Gm7638-201ENSMUST00000121348 967 ntBASIC17.79■□□□□ 0.44
Scn8aQ9WTU3 Gm18958-201ENSMUST00000174258 762 ntBASIC17.79■□□□□ 0.44
Scn8aQ9WTU3 Gm10231-201ENSMUST00000181584 441 ntBASIC17.79■□□□□ 0.44
Scn8aQ9WTU3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn8aQ9WTU3 Gm10175-202ENSMUST00000208752 441 ntBASIC17.79■□□□□ 0.44
Scn8aQ9WTU3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn8aQ9WTU3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn8aQ9WTU3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn8aQ9WTU3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scn8aQ9WTU3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn8aQ9WTU3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn8aQ9WTU3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn8aQ9WTU3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn8aQ9WTU3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Scn8aQ9WTU3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn8aQ9WTU3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Scn8aQ9WTU3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scn8aQ9WTU3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn8aQ9WTU3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn8aQ9WTU3 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.78■□□□□ 0.44
Scn8aQ9WTU3 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.78■□□□□ 0.44
Scn8aQ9WTU3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn8aQ9WTU3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn8aQ9WTU3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn8aQ9WTU3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn8aQ9WTU3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn8aQ9WTU3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Scn8aQ9WTU3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn8aQ9WTU3 Gm27463-201ENSMUST00000183569 57 ntBASIC17.77■□□□□ 0.44
Scn8aQ9WTU3 Gm7370-201ENSMUST00000219471 767 ntBASIC17.77■□□□□ 0.44
Scn8aQ9WTU3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn8aQ9WTU3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Scn8aQ9WTU3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.77■□□□□ 0.44
Scn8aQ9WTU3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Scn8aQ9WTU3 Gm7791-201ENSMUST00000219066 539 ntBASIC17.77■□□□□ 0.43
Scn8aQ9WTU3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Scn8aQ9WTU3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn8aQ9WTU3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn8aQ9WTU3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn8aQ9WTU3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn8aQ9WTU3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn8aQ9WTU3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.76■□□□□ 0.43
Scn8aQ9WTU3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn8aQ9WTU3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn8aQ9WTU3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Scn8aQ9WTU3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scn8aQ9WTU3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn8aQ9WTU3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.76■□□□□ 0.43
Scn8aQ9WTU3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn8aQ9WTU3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn8aQ9WTU3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Scn8aQ9WTU3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn8aQ9WTU3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn8aQ9WTU3 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.75■□□□□ 0.43
Scn8aQ9WTU3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn8aQ9WTU3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn8aQ9WTU3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn8aQ9WTU3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.75■□□□□ 0.43
Scn8aQ9WTU3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Scn8aQ9WTU3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Scn8aQ9WTU3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn8aQ9WTU3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn8aQ9WTU3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms