Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ube3bQ9ES34 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ube3bQ9ES34 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ube3bQ9ES34 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ube3bQ9ES34 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ube3bQ9ES34 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ube3bQ9ES34 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ube3bQ9ES34 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ube3bQ9ES34 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ube3bQ9ES34 Gm6433-201ENSMUST00000118634 875 ntBASIC21■□□□□ 0.95
Ube3bQ9ES34 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ube3bQ9ES34 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ube3bQ9ES34 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ube3bQ9ES34 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ube3bQ9ES34 Gm43272-201ENSMUST00000200599 1584 ntBASIC21■□□□□ 0.95
Ube3bQ9ES34 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ube3bQ9ES34 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ube3bQ9ES34 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ube3bQ9ES34 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Ube3bQ9ES34 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ube3bQ9ES34 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ube3bQ9ES34 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ube3bQ9ES34 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Ube3bQ9ES34 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Ube3bQ9ES34 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.98■□□□□ 0.95
Ube3bQ9ES34 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ube3bQ9ES34 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ube3bQ9ES34 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ube3bQ9ES34 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ube3bQ9ES34 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ube3bQ9ES34 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ube3bQ9ES34 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ube3bQ9ES34 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ube3bQ9ES34 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Ube3bQ9ES34 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.96■□□□□ 0.95
Ube3bQ9ES34 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.96■□□□□ 0.95
Ube3bQ9ES34 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ube3bQ9ES34 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ube3bQ9ES34 Gm27463-201ENSMUST00000183569 57 ntBASIC20.96■□□□□ 0.95
Ube3bQ9ES34 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ube3bQ9ES34 Gm9987-201ENSMUST00000069768 567 ntBASIC20.96■□□□□ 0.95
Ube3bQ9ES34 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.96■□□□□ 0.95
Ube3bQ9ES34 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ube3bQ9ES34 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ube3bQ9ES34 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ube3bQ9ES34 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Ube3bQ9ES34 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Ube3bQ9ES34 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube3bQ9ES34 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube3bQ9ES34 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Ube3bQ9ES34 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube3bQ9ES34 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.95■□□□□ 0.94
Ube3bQ9ES34 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube3bQ9ES34 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Ube3bQ9ES34 Gm7638-201ENSMUST00000121348 967 ntBASIC20.95■□□□□ 0.94
Ube3bQ9ES34 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ube3bQ9ES34 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms