Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ripk4Q9ERK0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
Ripk4Q9ERK0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ripk4Q9ERK0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.46■■□□□ 1.03
Ripk4Q9ERK0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ripk4Q9ERK0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ripk4Q9ERK0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ripk4Q9ERK0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ripk4Q9ERK0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Ripk4Q9ERK0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ripk4Q9ERK0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ripk4Q9ERK0 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.46■■□□□ 1.03
Ripk4Q9ERK0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ripk4Q9ERK0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Ripk4Q9ERK0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.45■■□□□ 1.02
Ripk4Q9ERK0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ripk4Q9ERK0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ripk4Q9ERK0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.45■■□□□ 1.02
Ripk4Q9ERK0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.45■■□□□ 1.02
Ripk4Q9ERK0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.45■■□□□ 1.02
Ripk4Q9ERK0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.45■■□□□ 1.02
Ripk4Q9ERK0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ripk4Q9ERK0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC21.45■■□□□ 1.02
Ripk4Q9ERK0 Gm3375-201ENSMUST00000203929 796 ntBASIC21.45■■□□□ 1.02
Ripk4Q9ERK0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ripk4Q9ERK0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ripk4Q9ERK0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ripk4Q9ERK0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ripk4Q9ERK0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ripk4Q9ERK0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ripk4Q9ERK0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ripk4Q9ERK0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.45■■□□□ 1.02
Ripk4Q9ERK0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ripk4Q9ERK0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ripk4Q9ERK0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ripk4Q9ERK0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.44■■□□□ 1.02
Ripk4Q9ERK0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Ripk4Q9ERK0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ripk4Q9ERK0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ripk4Q9ERK0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ripk4Q9ERK0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ripk4Q9ERK0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.44■■□□□ 1.02
Ripk4Q9ERK0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ripk4Q9ERK0 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.44■■□□□ 1.02
Ripk4Q9ERK0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.44■■□□□ 1.02
Ripk4Q9ERK0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ripk4Q9ERK0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ripk4Q9ERK0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC21.44■■□□□ 1.02
Ripk4Q9ERK0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ripk4Q9ERK0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ripk4Q9ERK0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ripk4Q9ERK0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ripk4Q9ERK0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ripk4Q9ERK0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ripk4Q9ERK0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ripk4Q9ERK0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
Ripk4Q9ERK0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ripk4Q9ERK0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ripk4Q9ERK0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ripk4Q9ERK0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ripk4Q9ERK0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
Ripk4Q9ERK0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Ripk4Q9ERK0 Gm13559-201ENSMUST00000120476 863 ntBASIC21.42■■□□□ 1.02
Ripk4Q9ERK0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ripk4Q9ERK0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ripk4Q9ERK0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ripk4Q9ERK0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ripk4Q9ERK0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ripk4Q9ERK0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ripk4Q9ERK0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ripk4Q9ERK0 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.41■■□□□ 1.02
Ripk4Q9ERK0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ripk4Q9ERK0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.41■■□□□ 1.02
Ripk4Q9ERK0 Gm11539-201ENSMUST00000119837 557 ntBASIC21.41■■□□□ 1.02
Ripk4Q9ERK0 Gm13436-201ENSMUST00000120418 567 ntBASIC21.41■■□□□ 1.02
Ripk4Q9ERK0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ripk4Q9ERK0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ripk4Q9ERK0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ripk4Q9ERK0 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.4■■□□□ 1.02
Ripk4Q9ERK0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ripk4Q9ERK0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ripk4Q9ERK0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ripk4Q9ERK0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ripk4Q9ERK0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ripk4Q9ERK0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ripk4Q9ERK0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ripk4Q9ERK0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ripk4Q9ERK0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.4■■□□□ 1.02
Ripk4Q9ERK0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ripk4Q9ERK0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.4■■□□□ 1.02
Ripk4Q9ERK0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ripk4Q9ERK0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ripk4Q9ERK0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ripk4Q9ERK0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ripk4Q9ERK0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ripk4Q9ERK0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ripk4Q9ERK0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Ripk4Q9ERK0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ripk4Q9ERK0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ripk4Q9ERK0 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.39■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms