Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Hmgn3Q9DCB1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Hmgn3Q9DCB1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgn3Q9DCB1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgn3Q9DCB1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgn3Q9DCB1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgn3Q9DCB1 Gm12251-201ENSMUST00000117893 792 ntBASIC16.57■□□□□ 0.24
Hmgn3Q9DCB1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgn3Q9DCB1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgn3Q9DCB1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Hmgn3Q9DCB1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgn3Q9DCB1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Hmgn3Q9DCB1 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.57■□□□□ 0.24
Hmgn3Q9DCB1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgn3Q9DCB1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Hmgn3Q9DCB1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgn3Q9DCB1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Gm27801-201ENSMUST00000184174 223 ntBASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgn3Q9DCB1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgn3Q9DCB1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgn3Q9DCB1 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.55■□□□□ 0.24
Hmgn3Q9DCB1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgn3Q9DCB1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgn3Q9DCB1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Hmgn3Q9DCB1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgn3Q9DCB1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgn3Q9DCB1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Hmgn3Q9DCB1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Hmgn3Q9DCB1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgn3Q9DCB1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Hmgn3Q9DCB1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgn3Q9DCB1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgn3Q9DCB1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgn3Q9DCB1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.55■□□□□ 0.24
Hmgn3Q9DCB1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgn3Q9DCB1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn3Q9DCB1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn3Q9DCB1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Hmgn3Q9DCB1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Hmgn3Q9DCB1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn3Q9DCB1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn3Q9DCB1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn3Q9DCB1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn3Q9DCB1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.54■□□□□ 0.24
Hmgn3Q9DCB1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.54■□□□□ 0.24
Hmgn3Q9DCB1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn3Q9DCB1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn3Q9DCB1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn3Q9DCB1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn3Q9DCB1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn3Q9DCB1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms