Protein–RNA interactions for Protein: Q9D0P8

Ift27, Intraflagellar transport protein 27 homolog, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27Q9D0P8 Gm12251-201ENSMUST00000117893 792 ntBASIC16.14■□□□□ 0.17
Ift27Q9D0P8 Smad6-203ENSMUST00000179458 273 ntBASIC16.14■□□□□ 0.17
Ift27Q9D0P8 Gm43137-201ENSMUST00000198052 594 ntBASIC16.14■□□□□ 0.17
Ift27Q9D0P8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ift27Q9D0P8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ift27Q9D0P8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.14■□□□□ 0.17
Ift27Q9D0P8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ift27Q9D0P8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ift27Q9D0P8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ift27Q9D0P8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ift27Q9D0P8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ift27Q9D0P8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ift27Q9D0P8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ift27Q9D0P8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift27Q9D0P8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift27Q9D0P8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift27Q9D0P8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Ift27Q9D0P8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.13■□□□□ 0.17
Ift27Q9D0P8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift27Q9D0P8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift27Q9D0P8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift27Q9D0P8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ift27Q9D0P8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift27Q9D0P8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Ift27Q9D0P8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.13■□□□□ 0.17
Ift27Q9D0P8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift27Q9D0P8 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.13■□□□□ 0.17
Ift27Q9D0P8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift27Q9D0P8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift27Q9D0P8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift27Q9D0P8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift27Q9D0P8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ift27Q9D0P8 Idnk-204ENSMUST00000226010 1898 ntBASIC16.12■□□□□ 0.17
Ift27Q9D0P8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ift27Q9D0P8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ift27Q9D0P8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ift27Q9D0P8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ift27Q9D0P8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Ift27Q9D0P8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ift27Q9D0P8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ift27Q9D0P8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ift27Q9D0P8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ift27Q9D0P8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ift27Q9D0P8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ift27Q9D0P8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ift27Q9D0P8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ift27Q9D0P8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ift27Q9D0P8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ift27Q9D0P8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ift27Q9D0P8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ift27Q9D0P8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ift27Q9D0P8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ift27Q9D0P8 Gm38205-201ENSMUST00000192243 258 ntBASIC16.11■□□□□ 0.17
Ift27Q9D0P8 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.11■□□□□ 0.17
Ift27Q9D0P8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.11■□□□□ 0.17
Ift27Q9D0P8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ift27Q9D0P8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ift27Q9D0P8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ift27Q9D0P8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Ift27Q9D0P8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ift27Q9D0P8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ift27Q9D0P8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ift27Q9D0P8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ift27Q9D0P8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ift27Q9D0P8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ift27Q9D0P8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ift27Q9D0P8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ift27Q9D0P8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ift27Q9D0P8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ift27Q9D0P8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ift27Q9D0P8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ift27Q9D0P8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ift27Q9D0P8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ift27Q9D0P8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Ift27Q9D0P8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ift27Q9D0P8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ift27Q9D0P8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ift27Q9D0P8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ift27Q9D0P8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ift27Q9D0P8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ift27Q9D0P8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ift27Q9D0P8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ift27Q9D0P8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ift27Q9D0P8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.09■□□□□ 0.17
Ift27Q9D0P8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ift27Q9D0P8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ift27Q9D0P8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ift27Q9D0P8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.09■□□□□ 0.17
Ift27Q9D0P8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ift27Q9D0P8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ift27Q9D0P8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ift27Q9D0P8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ift27Q9D0P8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ift27Q9D0P8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ift27Q9D0P8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ift27Q9D0P8 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.09■□□□□ 0.17
Ift27Q9D0P8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ift27Q9D0P8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ift27Q9D0P8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ift27Q9D0P8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms