Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1bQ9D0N7 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.62■□□□□ 0.25
Chaf1bQ9D0N7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
Chaf1bQ9D0N7 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.62■□□□□ 0.25
Chaf1bQ9D0N7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Chaf1bQ9D0N7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1bQ9D0N7 Gm43060-201ENSMUST00000200621 289 ntBASIC16.62■□□□□ 0.25
Chaf1bQ9D0N7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1bQ9D0N7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.62■□□□□ 0.25
Chaf1bQ9D0N7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1bQ9D0N7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1bQ9D0N7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Chaf1bQ9D0N7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1bQ9D0N7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1bQ9D0N7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1bQ9D0N7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1bQ9D0N7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.62■□□□□ 0.25
Chaf1bQ9D0N7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1bQ9D0N7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Chaf1bQ9D0N7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.61■□□□□ 0.25
Chaf1bQ9D0N7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1bQ9D0N7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1bQ9D0N7 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.61■□□□□ 0.25
Chaf1bQ9D0N7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1bQ9D0N7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1bQ9D0N7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1bQ9D0N7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Chaf1bQ9D0N7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Chaf1bQ9D0N7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1bQ9D0N7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1bQ9D0N7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1bQ9D0N7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1bQ9D0N7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1bQ9D0N7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1bQ9D0N7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Reep4-203ENSMUST00000226563 1444 ntBASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1bQ9D0N7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.59■□□□□ 0.25
Chaf1bQ9D0N7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1bQ9D0N7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1bQ9D0N7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1bQ9D0N7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1bQ9D0N7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1bQ9D0N7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1bQ9D0N7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Chaf1bQ9D0N7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Chaf1bQ9D0N7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1bQ9D0N7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1bQ9D0N7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1bQ9D0N7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1bQ9D0N7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1bQ9D0N7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1bQ9D0N7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Chaf1bQ9D0N7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1bQ9D0N7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1bQ9D0N7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1bQ9D0N7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chaf1bQ9D0N7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chaf1bQ9D0N7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chaf1bQ9D0N7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1bQ9D0N7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1bQ9D0N7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.58■□□□□ 0.24
Chaf1bQ9D0N7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1bQ9D0N7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1bQ9D0N7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1bQ9D0N7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1bQ9D0N7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1bQ9D0N7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms