Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shmt2Q9CZN7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shmt2Q9CZN7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Shmt2Q9CZN7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Shmt2Q9CZN7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt2Q9CZN7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shmt2Q9CZN7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt2Q9CZN7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt2Q9CZN7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.83■□□□□ 0.28
Shmt2Q9CZN7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt2Q9CZN7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt2Q9CZN7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.83■□□□□ 0.28
Shmt2Q9CZN7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.83■□□□□ 0.28
Shmt2Q9CZN7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.83■□□□□ 0.28
Shmt2Q9CZN7 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.83■□□□□ 0.28
Shmt2Q9CZN7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt2Q9CZN7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt2Q9CZN7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt2Q9CZN7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt2Q9CZN7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Shmt2Q9CZN7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt2Q9CZN7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt2Q9CZN7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Shmt2Q9CZN7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shmt2Q9CZN7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shmt2Q9CZN7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shmt2Q9CZN7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shmt2Q9CZN7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shmt2Q9CZN7 Tgds-204ENSMUST00000228543 1594 ntBASIC16.82■□□□□ 0.28
Shmt2Q9CZN7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shmt2Q9CZN7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shmt2Q9CZN7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shmt2Q9CZN7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shmt2Q9CZN7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shmt2Q9CZN7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shmt2Q9CZN7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shmt2Q9CZN7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shmt2Q9CZN7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shmt2Q9CZN7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Shmt2Q9CZN7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 Gm44549-201ENSMUST00000208351 577 ntBASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shmt2Q9CZN7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
Shmt2Q9CZN7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shmt2Q9CZN7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shmt2Q9CZN7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shmt2Q9CZN7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shmt2Q9CZN7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shmt2Q9CZN7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shmt2Q9CZN7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shmt2Q9CZN7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Shmt2Q9CZN7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shmt2Q9CZN7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shmt2Q9CZN7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Shmt2Q9CZN7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shmt2Q9CZN7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shmt2Q9CZN7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shmt2Q9CZN7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Shmt2Q9CZN7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shmt2Q9CZN7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shmt2Q9CZN7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms