Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1Q9CQ70 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1Q9CQ70 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1Q9CQ70 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Gm13148-201ENSMUST00000118892 745 ntBASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1Q9CQ70 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Gm29791-202ENSMUST00000207888 369 ntBASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1Q9CQ70 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1Q9CQ70 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1Q9CQ70 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1Q9CQ70 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1Q9CQ70 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1Q9CQ70 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1Q9CQ70 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1Q9CQ70 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1Q9CQ70 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.42□□□□□ -0.1
H2afb1Q9CQ70 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1Q9CQ70 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1Q9CQ70 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1Q9CQ70 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1Q9CQ70 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1Q9CQ70 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
H2afb1Q9CQ70 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1Q9CQ70 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1Q9CQ70 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1Q9CQ70 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1Q9CQ70 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Gm12933-201ENSMUST00000120203 872 ntBASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1Q9CQ70 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms