Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim11Q99PQ2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Trim11Q99PQ2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim11Q99PQ2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim11Q99PQ2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim11Q99PQ2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim11Q99PQ2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim11Q99PQ2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim11Q99PQ2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.1■□□□□ 0.81
Trim11Q99PQ2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim11Q99PQ2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim11Q99PQ2 Gm2559-201ENSMUST00000201323 363 ntBASIC20.1■□□□□ 0.81
Trim11Q99PQ2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim11Q99PQ2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim11Q99PQ2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim11Q99PQ2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim11Q99PQ2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim11Q99PQ2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim11Q99PQ2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim11Q99PQ2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim11Q99PQ2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim11Q99PQ2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim11Q99PQ2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim11Q99PQ2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim11Q99PQ2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.09■□□□□ 0.81
Trim11Q99PQ2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim11Q99PQ2 Gm4968-201ENSMUST00000071458 858 ntBASIC20.09■□□□□ 0.81
Trim11Q99PQ2 Gm10602-201ENSMUST00000098239 609 ntBASIC20.09■□□□□ 0.81
Trim11Q99PQ2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim11Q99PQ2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim11Q99PQ2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim11Q99PQ2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim11Q99PQ2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim11Q99PQ2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim11Q99PQ2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim11Q99PQ2 Mir2861-201ENSMUST00000175539 82 ntBASIC20.08■□□□□ 0.81
Trim11Q99PQ2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim11Q99PQ2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim11Q99PQ2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim11Q99PQ2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim11Q99PQ2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim11Q99PQ2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim11Q99PQ2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim11Q99PQ2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim11Q99PQ2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Trim11Q99PQ2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim11Q99PQ2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Trim11Q99PQ2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.07■□□□□ 0.8
Trim11Q99PQ2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim11Q99PQ2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim11Q99PQ2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim11Q99PQ2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim11Q99PQ2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Trim11Q99PQ2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim11Q99PQ2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim11Q99PQ2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.07■□□□□ 0.8
Trim11Q99PQ2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim11Q99PQ2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim11Q99PQ2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim11Q99PQ2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim11Q99PQ2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trim11Q99PQ2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim11Q99PQ2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim11Q99PQ2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim11Q99PQ2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim11Q99PQ2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
Trim11Q99PQ2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim11Q99PQ2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.06■□□□□ 0.8
Trim11Q99PQ2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim11Q99PQ2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim11Q99PQ2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim11Q99PQ2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trim11Q99PQ2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim11Q99PQ2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
Trim11Q99PQ2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim11Q99PQ2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim11Q99PQ2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim11Q99PQ2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms