Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim33Q99PP7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim33Q99PP7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim33Q99PP7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim33Q99PP7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim33Q99PP7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim33Q99PP7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim33Q99PP7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim33Q99PP7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim33Q99PP7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim33Q99PP7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trim33Q99PP7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim33Q99PP7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim33Q99PP7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim33Q99PP7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim33Q99PP7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim33Q99PP7 Gm27011-201ENSMUST00000182352 972 ntBASIC17.47■□□□□ 0.39
Trim33Q99PP7 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.47■□□□□ 0.39
Trim33Q99PP7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.47■□□□□ 0.39
Trim33Q99PP7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim33Q99PP7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim33Q99PP7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim33Q99PP7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim33Q99PP7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim33Q99PP7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim33Q99PP7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim33Q99PP7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim33Q99PP7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim33Q99PP7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.46■□□□□ 0.39
Trim33Q99PP7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim33Q99PP7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim33Q99PP7 Mtag2-201ENSMUST00000058665 714 ntBASIC17.46■□□□□ 0.39
Trim33Q99PP7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim33Q99PP7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim33Q99PP7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim33Q99PP7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim33Q99PP7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim33Q99PP7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.38
Trim33Q99PP7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Trim33Q99PP7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim33Q99PP7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim33Q99PP7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim33Q99PP7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim33Q99PP7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim33Q99PP7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.45■□□□□ 0.38
Trim33Q99PP7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim33Q99PP7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim33Q99PP7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim33Q99PP7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim33Q99PP7 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.45■□□□□ 0.38
Trim33Q99PP7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Trim33Q99PP7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim33Q99PP7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim33Q99PP7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim33Q99PP7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim33Q99PP7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim33Q99PP7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim33Q99PP7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim33Q99PP7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim33Q99PP7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim33Q99PP7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim33Q99PP7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim33Q99PP7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim33Q99PP7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim33Q99PP7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim33Q99PP7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim33Q99PP7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.44■□□□□ 0.38
Trim33Q99PP7 Gm20760-201ENSMUST00000179197 648 ntBASIC17.44■□□□□ 0.38
Trim33Q99PP7 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.44■□□□□ 0.38
Trim33Q99PP7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim33Q99PP7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim33Q99PP7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim33Q99PP7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trim33Q99PP7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim33Q99PP7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim33Q99PP7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim33Q99PP7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim33Q99PP7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim33Q99PP7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim33Q99PP7 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.43■□□□□ 0.38
Trim33Q99PP7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim33Q99PP7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim33Q99PP7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim33Q99PP7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
Trim33Q99PP7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.43■□□□□ 0.38
Trim33Q99PP7 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.43■□□□□ 0.38
Trim33Q99PP7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trim33Q99PP7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Trim33Q99PP7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim33Q99PP7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
Trim33Q99PP7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.43■□□□□ 0.38
Trim33Q99PP7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim33Q99PP7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim33Q99PP7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim33Q99PP7 Fst-202ENSMUST00000223640 2612 ntBASIC17.42■□□□□ 0.38
Trim33Q99PP7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim33Q99PP7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trim33Q99PP7 Gm13158-201ENSMUST00000122007 736 ntBASIC17.42■□□□□ 0.38
Trim33Q99PP7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Trim33Q99PP7 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms