Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdk5rap3Q99LM2 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.29■□□□□ 0.52
Cdk5rap3Q99LM2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdk5rap3Q99LM2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cdk5rap3Q99LM2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdk5rap3Q99LM2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdk5rap3Q99LM2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdk5rap3Q99LM2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdk5rap3Q99LM2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdk5rap3Q99LM2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdk5rap3Q99LM2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdk5rap3Q99LM2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdk5rap3Q99LM2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.29■□□□□ 0.52
Cdk5rap3Q99LM2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdk5rap3Q99LM2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdk5rap3Q99LM2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdk5rap3Q99LM2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdk5rap3Q99LM2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdk5rap3Q99LM2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.28■□□□□ 0.52
Cdk5rap3Q99LM2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdk5rap3Q99LM2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cdk5rap3Q99LM2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.28■□□□□ 0.52
Cdk5rap3Q99LM2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdk5rap3Q99LM2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdk5rap3Q99LM2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdk5rap3Q99LM2 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.27■□□□□ 0.52
Cdk5rap3Q99LM2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdk5rap3Q99LM2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdk5rap3Q99LM2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.27■□□□□ 0.52
Cdk5rap3Q99LM2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.27■□□□□ 0.52
Cdk5rap3Q99LM2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cdk5rap3Q99LM2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Cdk5rap3Q99LM2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Cdk5rap3Q99LM2 Gm7290-201ENSMUST00000104990 617 ntBASIC18.27■□□□□ 0.52
Cdk5rap3Q99LM2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Cdk5rap3Q99LM2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdk5rap3Q99LM2 Gm12918-201ENSMUST00000120234 636 ntBASIC18.27■□□□□ 0.52
Cdk5rap3Q99LM2 Gm15710-201ENSMUST00000121821 636 ntBASIC18.27■□□□□ 0.52
Cdk5rap3Q99LM2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.27■□□□□ 0.52
Cdk5rap3Q99LM2 Gm38285-201ENSMUST00000192928 922 ntBASIC18.27■□□□□ 0.52
Cdk5rap3Q99LM2 Gm5075-201ENSMUST00000196916 622 ntBASIC18.27■□□□□ 0.52
Cdk5rap3Q99LM2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdk5rap3Q99LM2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.27■□□□□ 0.52
Cdk5rap3Q99LM2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.27■□□□□ 0.52
Cdk5rap3Q99LM2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdk5rap3Q99LM2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdk5rap3Q99LM2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdk5rap3Q99LM2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cdk5rap3Q99LM2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdk5rap3Q99LM2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdk5rap3Q99LM2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdk5rap3Q99LM2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Cdk5rap3Q99LM2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdk5rap3Q99LM2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cdk5rap3Q99LM2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdk5rap3Q99LM2 Gm10849-201ENSMUST00000100397 618 ntBASIC18.26■□□□□ 0.51
Cdk5rap3Q99LM2 Gm6211-202ENSMUST00000167849 925 ntBASIC18.26■□□□□ 0.51
Cdk5rap3Q99LM2 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.26■□□□□ 0.51
Cdk5rap3Q99LM2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdk5rap3Q99LM2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdk5rap3Q99LM2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdk5rap3Q99LM2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdk5rap3Q99LM2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdk5rap3Q99LM2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.25■□□□□ 0.51
Cdk5rap3Q99LM2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.25■□□□□ 0.51
Cdk5rap3Q99LM2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdk5rap3Q99LM2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdk5rap3Q99LM2 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.25■□□□□ 0.51
Cdk5rap3Q99LM2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdk5rap3Q99LM2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.25■□□□□ 0.51
Cdk5rap3Q99LM2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdk5rap3Q99LM2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdk5rap3Q99LM2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdk5rap3Q99LM2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.25■□□□□ 0.51
Cdk5rap3Q99LM2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdk5rap3Q99LM2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdk5rap3Q99LM2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdk5rap3Q99LM2 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.25■□□□□ 0.51
Cdk5rap3Q99LM2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdk5rap3Q99LM2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdk5rap3Q99LM2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap3Q99LM2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap3Q99LM2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cdk5rap3Q99LM2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap3Q99LM2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap3Q99LM2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap3Q99LM2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap3Q99LM2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap3Q99LM2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap3Q99LM2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap3Q99LM2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap3Q99LM2 Gm2399-201ENSMUST00000104944 225 ntBASIC18.24■□□□□ 0.51
Cdk5rap3Q99LM2 Gm26571-201ENSMUST00000181399 666 ntBASIC18.24■□□□□ 0.51
Cdk5rap3Q99LM2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.24■□□□□ 0.51
Cdk5rap3Q99LM2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap3Q99LM2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap3Q99LM2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap3Q99LM2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap3Q99LM2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap3Q99LM2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms