Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha3Q91Y16 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
Pcdha3Q91Y16 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha3Q91Y16 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
Pcdha3Q91Y16 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Pcdha3Q91Y16 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha3Q91Y16 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha3Q91Y16 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdha3Q91Y16 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha3Q91Y16 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha3Q91Y16 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha3Q91Y16 Gm15378-201ENSMUST00000121894 207 ntBASIC18.43■□□□□ 0.54
Pcdha3Q91Y16 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Pcdha3Q91Y16 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.43■□□□□ 0.54
Pcdha3Q91Y16 Gm8969-201ENSMUST00000199694 526 ntBASIC18.43■□□□□ 0.54
Pcdha3Q91Y16 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha3Q91Y16 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha3Q91Y16 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha3Q91Y16 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha3Q91Y16 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha3Q91Y16 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha3Q91Y16 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha3Q91Y16 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdha3Q91Y16 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pcdha3Q91Y16 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdha3Q91Y16 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.42■□□□□ 0.54
Pcdha3Q91Y16 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.42■□□□□ 0.54
Pcdha3Q91Y16 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdha3Q91Y16 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha3Q91Y16 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha3Q91Y16 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha3Q91Y16 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha3Q91Y16 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha3Q91Y16 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha3Q91Y16 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha3Q91Y16 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha3Q91Y16 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.4■□□□□ 0.54
Pcdha3Q91Y16 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha3Q91Y16 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha3Q91Y16 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha3Q91Y16 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha3Q91Y16 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha3Q91Y16 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.4■□□□□ 0.54
Pcdha3Q91Y16 Mir6349-201ENSMUST00000184059 97 ntBASIC18.4■□□□□ 0.54
Pcdha3Q91Y16 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.4■□□□□ 0.54
Pcdha3Q91Y16 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.4■□□□□ 0.54
Pcdha3Q91Y16 Mtag2-201ENSMUST00000058665 714 ntBASIC18.4■□□□□ 0.54
Pcdha3Q91Y16 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha3Q91Y16 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdha3Q91Y16 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha3Q91Y16 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha3Q91Y16 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdha3Q91Y16 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha3Q91Y16 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha3Q91Y16 Gm15375-201ENSMUST00000119510 849 ntBASIC18.39■□□□□ 0.53
Pcdha3Q91Y16 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha3Q91Y16 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Pcdha3Q91Y16 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdha3Q91Y16 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha3Q91Y16 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.39■□□□□ 0.53
Pcdha3Q91Y16 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha3Q91Y16 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdha3Q91Y16 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha3Q91Y16 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha3Q91Y16 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdha3Q91Y16 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha3Q91Y16 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha3Q91Y16 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.39■□□□□ 0.53
Pcdha3Q91Y16 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha3Q91Y16 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha3Q91Y16 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha3Q91Y16 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha3Q91Y16 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Pcdha3Q91Y16 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha3Q91Y16 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha3Q91Y16 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha3Q91Y16 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Pcdha3Q91Y16 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
Pcdha3Q91Y16 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha3Q91Y16 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms