Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb20Q91XZ9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb20Q91XZ9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb20Q91XZ9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb20Q91XZ9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb20Q91XZ9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb20Q91XZ9 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC16.96■□□□□ 0.31
Pcdhb20Q91XZ9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Pcdhb20Q91XZ9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.96■□□□□ 0.31
Pcdhb20Q91XZ9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb20Q91XZ9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb20Q91XZ9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb20Q91XZ9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Pcdhb20Q91XZ9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb20Q91XZ9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Pcdhb20Q91XZ9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb20Q91XZ9 Fst-202ENSMUST00000223640 2612 ntBASIC16.96■□□□□ 0.3
Pcdhb20Q91XZ9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb20Q91XZ9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Pcdhb20Q91XZ9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Pcdhb20Q91XZ9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Pcdhb20Q91XZ9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb20Q91XZ9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb20Q91XZ9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pcdhb20Q91XZ9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb20Q91XZ9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.95■□□□□ 0.3
Pcdhb20Q91XZ9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdhb20Q91XZ9 Mir5122-201ENSMUST00000175004 89 ntBASIC16.95■□□□□ 0.3
Pcdhb20Q91XZ9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb20Q91XZ9 Gm5244-202ENSMUST00000189517 743 ntBASIC16.95■□□□□ 0.3
Pcdhb20Q91XZ9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.95■□□□□ 0.3
Pcdhb20Q91XZ9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb20Q91XZ9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb20Q91XZ9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb20Q91XZ9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pcdhb20Q91XZ9 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.95■□□□□ 0.3
Pcdhb20Q91XZ9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb20Q91XZ9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb20Q91XZ9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdhb20Q91XZ9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb20Q91XZ9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.95■□□□□ 0.3
Pcdhb20Q91XZ9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 Gm29791-202ENSMUST00000207888 369 ntBASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 Gm45696-201ENSMUST00000212088 985 ntBASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb20Q91XZ9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.93■□□□□ 0.3
Pcdhb20Q91XZ9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhb20Q91XZ9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb20Q91XZ9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb20Q91XZ9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb20Q91XZ9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb20Q91XZ9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Pcdhb20Q91XZ9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb20Q91XZ9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb20Q91XZ9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb20Q91XZ9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb20Q91XZ9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb20Q91XZ9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhb20Q91XZ9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhb20Q91XZ9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Pcdhb20Q91XZ9 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb20Q91XZ9 Gm37055-201ENSMUST00000191866 133 ntBASIC16.93■□□□□ 0.3
Pcdhb20Q91XZ9 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.93■□□□□ 0.3
Pcdhb20Q91XZ9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhb20Q91XZ9 Gm2594-201ENSMUST00000214774 742 ntBASIC16.93■□□□□ 0.3
Pcdhb20Q91XZ9 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms