Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.68■□□□□ 0.58
Pcdhgb4Q91XX6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdhgb4Q91XX6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb4Q91XX6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhgb4Q91XX6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb4Q91XX6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb4Q91XX6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb4Q91XX6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb4Q91XX6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb4Q91XX6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb4Q91XX6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb4Q91XX6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.66■□□□□ 0.58
Pcdhgb4Q91XX6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb4Q91XX6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.66■□□□□ 0.58
Pcdhgb4Q91XX6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb4Q91XX6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb4Q91XX6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb4Q91XX6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhgb4Q91XX6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb4Q91XX6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb4Q91XX6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb4Q91XX6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb4Q91XX6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb4Q91XX6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhgb4Q91XX6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb4Q91XX6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhgb4Q91XX6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb4Q91XX6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.65■□□□□ 0.58
Pcdhgb4Q91XX6 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb4Q91XX6 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb4Q91XX6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb4Q91XX6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhgb4Q91XX6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhgb4Q91XX6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhgb4Q91XX6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhgb4Q91XX6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhgb4Q91XX6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb4Q91XX6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb4Q91XX6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb4Q91XX6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb4Q91XX6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.64■□□□□ 0.57
Pcdhgb4Q91XX6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb4Q91XX6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb4Q91XX6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb4Q91XX6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhgb4Q91XX6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb4Q91XX6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb4Q91XX6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb4Q91XX6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb4Q91XX6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhgb4Q91XX6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb4Q91XX6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb4Q91XX6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb4Q91XX6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb4Q91XX6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Pcdhgb4Q91XX6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb4Q91XX6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb4Q91XX6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb4Q91XX6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb4Q91XX6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb4Q91XX6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb4Q91XX6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhgb4Q91XX6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb4Q91XX6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb4Q91XX6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb4Q91XX6 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.62■□□□□ 0.57
Pcdhgb4Q91XX6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb4Q91XX6 Gm12896-201ENSMUST00000118430 226 ntBASIC18.62■□□□□ 0.57
Pcdhgb4Q91XX6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb4Q91XX6 Mir2861-201ENSMUST00000175539 82 ntBASIC18.62■□□□□ 0.57
Pcdhgb4Q91XX6 Gm2559-201ENSMUST00000201323 363 ntBASIC18.62■□□□□ 0.57
Pcdhgb4Q91XX6 Gm4968-201ENSMUST00000071458 858 ntBASIC18.62■□□□□ 0.57
Pcdhgb4Q91XX6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb4Q91XX6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb4Q91XX6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhgb4Q91XX6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms