Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgc3Q91XX1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgc3Q91XX1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgc3Q91XX1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgc3Q91XX1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgc3Q91XX1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgc3Q91XX1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgc3Q91XX1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgc3Q91XX1 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.67■□□□□ 0.26
Pcdhgc3Q91XX1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhgc3Q91XX1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgc3Q91XX1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgc3Q91XX1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhgc3Q91XX1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgc3Q91XX1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgc3Q91XX1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhgc3Q91XX1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgc3Q91XX1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgc3Q91XX1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgc3Q91XX1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Pcdhgc3Q91XX1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgc3Q91XX1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgc3Q91XX1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgc3Q91XX1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
Pcdhgc3Q91XX1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgc3Q91XX1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgc3Q91XX1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgc3Q91XX1 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.66■□□□□ 0.26
Pcdhgc3Q91XX1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgc3Q91XX1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Pcdhgc3Q91XX1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.66■□□□□ 0.26
Pcdhgc3Q91XX1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgc3Q91XX1 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.66■□□□□ 0.26
Pcdhgc3Q91XX1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgc3Q91XX1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pcdhgc3Q91XX1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgc3Q91XX1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgc3Q91XX1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgc3Q91XX1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Gm43060-201ENSMUST00000200621 289 ntBASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgc3Q91XX1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdhgc3Q91XX1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdhgc3Q91XX1 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.64■□□□□ 0.26
Pcdhgc3Q91XX1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
Pcdhgc3Q91XX1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhgc3Q91XX1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgc3Q91XX1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgc3Q91XX1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgc3Q91XX1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhgc3Q91XX1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgc3Q91XX1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhgc3Q91XX1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgc3Q91XX1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.64■□□□□ 0.25
Pcdhgc3Q91XX1 Gm38205-201ENSMUST00000192243 258 ntBASIC16.64■□□□□ 0.25
Pcdhgc3Q91XX1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgc3Q91XX1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgc3Q91XX1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgc3Q91XX1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgc3Q91XX1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgc3Q91XX1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhgc3Q91XX1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgc3Q91XX1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgc3Q91XX1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgc3Q91XX1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgc3Q91XX1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhgc3Q91XX1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhgc3Q91XX1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgc3Q91XX1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgc3Q91XX1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgc3Q91XX1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgc3Q91XX1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgc3Q91XX1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.63■□□□□ 0.25
Pcdhgc3Q91XX1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.63■□□□□ 0.25
Pcdhgc3Q91XX1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Pcdhgc3Q91XX1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgc3Q91XX1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.63■□□□□ 0.25
Pcdhgc3Q91XX1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgc3Q91XX1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms