Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cdhr1Q8VHP6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdhr1Q8VHP6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdhr1Q8VHP6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cdhr1Q8VHP6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdhr1Q8VHP6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdhr1Q8VHP6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
Cdhr1Q8VHP6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdhr1Q8VHP6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.2■□□□□ 0.34
Cdhr1Q8VHP6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Golph3-205ENSMUST00000228671 2842 ntBASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdhr1Q8VHP6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr1Q8VHP6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr1Q8VHP6 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.18■□□□□ 0.34
Cdhr1Q8VHP6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr1Q8VHP6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr1Q8VHP6 Gm38027-201ENSMUST00000192315 235 ntBASIC17.18■□□□□ 0.34
Cdhr1Q8VHP6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cdhr1Q8VHP6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr1Q8VHP6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cdhr1Q8VHP6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr1Q8VHP6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr1Q8VHP6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr1Q8VHP6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr1Q8VHP6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdhr1Q8VHP6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr1Q8VHP6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr1Q8VHP6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr1Q8VHP6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr1Q8VHP6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.17■□□□□ 0.34
Cdhr1Q8VHP6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr1Q8VHP6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr1Q8VHP6 Gm27463-201ENSMUST00000183569 57 ntBASIC17.17■□□□□ 0.34
Cdhr1Q8VHP6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Cdhr1Q8VHP6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.17■□□□□ 0.34
Cdhr1Q8VHP6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr1Q8VHP6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr1Q8VHP6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Cdhr1Q8VHP6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cdhr1Q8VHP6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdhr1Q8VHP6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr1Q8VHP6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.16■□□□□ 0.34
Cdhr1Q8VHP6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr1Q8VHP6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.16■□□□□ 0.34
Cdhr1Q8VHP6 Gm10418-201ENSMUST00000100943 576 ntBASIC17.16■□□□□ 0.34
Cdhr1Q8VHP6 Gm13401-201ENSMUST00000117074 291 ntBASIC17.16■□□□□ 0.34
Cdhr1Q8VHP6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Cdhr1Q8VHP6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.16■□□□□ 0.34
Cdhr1Q8VHP6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.16■□□□□ 0.34
Cdhr1Q8VHP6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.16■□□□□ 0.34
Cdhr1Q8VHP6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr1Q8VHP6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr1Q8VHP6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr1Q8VHP6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr1Q8VHP6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr1Q8VHP6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdhr1Q8VHP6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.15■□□□□ 0.34
Cdhr1Q8VHP6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms