Protein–RNA interactions for Protein: Q8VE37

Rcc1, Regulator of chromosome condensation, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcc1Q8VE37 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rcc1Q8VE37 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rcc1Q8VE37 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rcc1Q8VE37 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rcc1Q8VE37 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rcc1Q8VE37 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rcc1Q8VE37 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rcc1Q8VE37 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rcc1Q8VE37 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rcc1Q8VE37 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rcc1Q8VE37 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rcc1Q8VE37 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rcc1Q8VE37 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rcc1Q8VE37 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rcc1Q8VE37 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rcc1Q8VE37 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.21■□□□□ 0.03
Rcc1Q8VE37 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rcc1Q8VE37 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rcc1Q8VE37 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rcc1Q8VE37 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rcc1Q8VE37 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Rcc1Q8VE37 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Rcc1Q8VE37 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rcc1Q8VE37 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.2■□□□□ 0.02
Rcc1Q8VE37 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.2■□□□□ 0.02
Rcc1Q8VE37 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.2■□□□□ 0.02
Rcc1Q8VE37 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rcc1Q8VE37 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Rcc1Q8VE37 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rcc1Q8VE37 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rcc1Q8VE37 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rcc1Q8VE37 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rcc1Q8VE37 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.2■□□□□ 0.02
Rcc1Q8VE37 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rcc1Q8VE37 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.2■□□□□ 0.02
Rcc1Q8VE37 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.2■□□□□ 0.02
Rcc1Q8VE37 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rcc1Q8VE37 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rcc1Q8VE37 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rcc1Q8VE37 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rcc1Q8VE37 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rcc1Q8VE37 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rcc1Q8VE37 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rcc1Q8VE37 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rcc1Q8VE37 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rcc1Q8VE37 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.19■□□□□ 0.02
Rcc1Q8VE37 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rcc1Q8VE37 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rcc1Q8VE37 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Rcc1Q8VE37 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rcc1Q8VE37 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rcc1Q8VE37 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rcc1Q8VE37 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rcc1Q8VE37 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Gm8495-201ENSMUST00000188740 694 ntBASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rcc1Q8VE37 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rcc1Q8VE37 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rcc1Q8VE37 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rcc1Q8VE37 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rcc1Q8VE37 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rcc1Q8VE37 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rcc1Q8VE37 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rcc1Q8VE37 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rcc1Q8VE37 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rcc1Q8VE37 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rcc1Q8VE37 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rcc1Q8VE37 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.17■□□□□ 0.02
Rcc1Q8VE37 Gm7290-201ENSMUST00000104990 617 ntBASIC15.17■□□□□ 0.02
Rcc1Q8VE37 Gm12918-201ENSMUST00000120234 636 ntBASIC15.17■□□□□ 0.02
Rcc1Q8VE37 Gm15710-201ENSMUST00000121821 636 ntBASIC15.17■□□□□ 0.02
Rcc1Q8VE37 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rcc1Q8VE37 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rcc1Q8VE37 Gm6211-202ENSMUST00000167849 925 ntBASIC15.17■□□□□ 0.02
Rcc1Q8VE37 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.17■□□□□ 0.02
Rcc1Q8VE37 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rcc1Q8VE37 Gm5075-201ENSMUST00000196916 622 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms