Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Zcchc9Q8R1J3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Zcchc9Q8R1J3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Zcchc9Q8R1J3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Zcchc9Q8R1J3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.6■□□□□ 0.41
Zcchc9Q8R1J3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Zcchc9Q8R1J3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zcchc9Q8R1J3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zcchc9Q8R1J3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zcchc9Q8R1J3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Zcchc9Q8R1J3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Zcchc9Q8R1J3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zcchc9Q8R1J3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zcchc9Q8R1J3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.59■□□□□ 0.41
Zcchc9Q8R1J3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Zcchc9Q8R1J3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zcchc9Q8R1J3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.59■□□□□ 0.41
Zcchc9Q8R1J3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Zcchc9Q8R1J3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zcchc9Q8R1J3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zcchc9Q8R1J3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zcchc9Q8R1J3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Zcchc9Q8R1J3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zcchc9Q8R1J3 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.59■□□□□ 0.41
Zcchc9Q8R1J3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Zcchc9Q8R1J3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Zcchc9Q8R1J3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Zcchc9Q8R1J3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.58■□□□□ 0.41
Zcchc9Q8R1J3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Zcchc9Q8R1J3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Zcchc9Q8R1J3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Zcchc9Q8R1J3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Zcchc9Q8R1J3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Zcchc9Q8R1J3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Zcchc9Q8R1J3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Zcchc9Q8R1J3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Zcchc9Q8R1J3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Zcchc9Q8R1J3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.58■□□□□ 0.4
Zcchc9Q8R1J3 Mir6349-201ENSMUST00000184059 97 ntBASIC17.58■□□□□ 0.4
Zcchc9Q8R1J3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Zcchc9Q8R1J3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.58■□□□□ 0.4
Zcchc9Q8R1J3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.58■□□□□ 0.4
Zcchc9Q8R1J3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Zcchc9Q8R1J3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.58■□□□□ 0.4
Zcchc9Q8R1J3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Zcchc9Q8R1J3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Zcchc9Q8R1J3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Zcchc9Q8R1J3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Zcchc9Q8R1J3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zcchc9Q8R1J3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zcchc9Q8R1J3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zcchc9Q8R1J3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Zcchc9Q8R1J3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zcchc9Q8R1J3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zcchc9Q8R1J3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.57■□□□□ 0.4
Zcchc9Q8R1J3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Zcchc9Q8R1J3 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.57■□□□□ 0.4
Zcchc9Q8R1J3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zcchc9Q8R1J3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.57■□□□□ 0.4
Zcchc9Q8R1J3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zcchc9Q8R1J3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zcchc9Q8R1J3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zcchc9Q8R1J3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Zcchc9Q8R1J3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Zcchc9Q8R1J3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Zcchc9Q8R1J3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Zcchc9Q8R1J3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Zcchc9Q8R1J3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Zcchc9Q8R1J3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Zcchc9Q8R1J3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Zcchc9Q8R1J3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Zcchc9Q8R1J3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Zcchc9Q8R1J3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Zcchc9Q8R1J3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Zcchc9Q8R1J3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Zcchc9Q8R1J3 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.56■□□□□ 0.4
Zcchc9Q8R1J3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Zcchc9Q8R1J3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zcchc9Q8R1J3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Zcchc9Q8R1J3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zcchc9Q8R1J3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Zcchc9Q8R1J3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zcchc9Q8R1J3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Zcchc9Q8R1J3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Zcchc9Q8R1J3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.55■□□□□ 0.4
Zcchc9Q8R1J3 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.55■□□□□ 0.4
Zcchc9Q8R1J3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zcchc9Q8R1J3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zcchc9Q8R1J3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Zcchc9Q8R1J3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Zcchc9Q8R1J3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zcchc9Q8R1J3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zcchc9Q8R1J3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zcchc9Q8R1J3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zcchc9Q8R1J3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zcchc9Q8R1J3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Zcchc9Q8R1J3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.54■□□□□ 0.4
Zcchc9Q8R1J3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Zcchc9Q8R1J3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Zcchc9Q8R1J3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms