Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sf3a1Q8K4Z5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sf3a1Q8K4Z5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sf3a1Q8K4Z5 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sf3a1Q8K4Z5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sf3a1Q8K4Z5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sf3a1Q8K4Z5 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sf3a1Q8K4Z5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC21.59■■□□□ 1.05
Sf3a1Q8K4Z5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sf3a1Q8K4Z5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.58■■□□□ 1.05
Sf3a1Q8K4Z5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sf3a1Q8K4Z5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sf3a1Q8K4Z5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sf3a1Q8K4Z5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sf3a1Q8K4Z5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Sf3a1Q8K4Z5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Sf3a1Q8K4Z5 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Sf3a1Q8K4Z5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.58■■□□□ 1.05
Sf3a1Q8K4Z5 Gm29791-202ENSMUST00000207888 369 ntBASIC21.58■■□□□ 1.05
Sf3a1Q8K4Z5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sf3a1Q8K4Z5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Sf3a1Q8K4Z5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sf3a1Q8K4Z5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sf3a1Q8K4Z5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Sf3a1Q8K4Z5 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Sf3a1Q8K4Z5 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Sf3a1Q8K4Z5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Sf3a1Q8K4Z5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Sf3a1Q8K4Z5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sf3a1Q8K4Z5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Sf3a1Q8K4Z5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sf3a1Q8K4Z5 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sf3a1Q8K4Z5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sf3a1Q8K4Z5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Sf3a1Q8K4Z5 Gm10418-201ENSMUST00000100943 576 ntBASIC21.57■■□□□ 1.04
Sf3a1Q8K4Z5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sf3a1Q8K4Z5 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sf3a1Q8K4Z5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
Sf3a1Q8K4Z5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sf3a1Q8K4Z5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Sf3a1Q8K4Z5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
Sf3a1Q8K4Z5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Sf3a1Q8K4Z5 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sf3a1Q8K4Z5 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
Sf3a1Q8K4Z5 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sf3a1Q8K4Z5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.56■■□□□ 1.04
Sf3a1Q8K4Z5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sf3a1Q8K4Z5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.56■■□□□ 1.04
Sf3a1Q8K4Z5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sf3a1Q8K4Z5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sf3a1Q8K4Z5 Gm10812-201ENSMUST00000099864 546 ntBASIC21.56■■□□□ 1.04
Sf3a1Q8K4Z5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sf3a1Q8K4Z5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sf3a1Q8K4Z5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Sf3a1Q8K4Z5 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sf3a1Q8K4Z5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sf3a1Q8K4Z5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sf3a1Q8K4Z5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sf3a1Q8K4Z5 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sf3a1Q8K4Z5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sf3a1Q8K4Z5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sf3a1Q8K4Z5 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sf3a1Q8K4Z5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Sf3a1Q8K4Z5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sf3a1Q8K4Z5 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.55■■□□□ 1.04
Sf3a1Q8K4Z5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sf3a1Q8K4Z5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sf3a1Q8K4Z5 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.55■■□□□ 1.04
Sf3a1Q8K4Z5 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sf3a1Q8K4Z5 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sf3a1Q8K4Z5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sf3a1Q8K4Z5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Sf3a1Q8K4Z5 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.54■■□□□ 1.04
Sf3a1Q8K4Z5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.54■■□□□ 1.04
Sf3a1Q8K4Z5 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sf3a1Q8K4Z5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Sf3a1Q8K4Z5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sf3a1Q8K4Z5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sf3a1Q8K4Z5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sf3a1Q8K4Z5 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sf3a1Q8K4Z5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
Sf3a1Q8K4Z5 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.53■■□□□ 1.04
Sf3a1Q8K4Z5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.53■■□□□ 1.04
Sf3a1Q8K4Z5 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sf3a1Q8K4Z5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sf3a1Q8K4Z5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
Sf3a1Q8K4Z5 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sf3a1Q8K4Z5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sf3a1Q8K4Z5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sf3a1Q8K4Z5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sf3a1Q8K4Z5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sf3a1Q8K4Z5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sf3a1Q8K4Z5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sf3a1Q8K4Z5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sf3a1Q8K4Z5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sf3a1Q8K4Z5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sf3a1Q8K4Z5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sf3a1Q8K4Z5 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Sf3a1Q8K4Z5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
Sf3a1Q8K4Z5 Gm13401-201ENSMUST00000117074 291 ntBASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms