Protein–RNA interactions for Protein: Q8K2T8

Paf1, RNA polymerase II-associated factor 1 homolog, mousemouse

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Paf1Q8K2T8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Paf1Q8K2T8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Paf1Q8K2T8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Paf1Q8K2T8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Paf1Q8K2T8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Paf1Q8K2T8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Paf1Q8K2T8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Paf1Q8K2T8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Paf1Q8K2T8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Paf1Q8K2T8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Paf1Q8K2T8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Paf1Q8K2T8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Paf1Q8K2T8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Paf1Q8K2T8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.66■□□□□ 0.9
Paf1Q8K2T8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Paf1Q8K2T8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.66■□□□□ 0.9
Paf1Q8K2T8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.66■□□□□ 0.9
Paf1Q8K2T8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Paf1Q8K2T8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Paf1Q8K2T8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Paf1Q8K2T8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Paf1Q8K2T8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Paf1Q8K2T8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Paf1Q8K2T8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Paf1Q8K2T8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Paf1Q8K2T8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Paf1Q8K2T8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Paf1Q8K2T8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Paf1Q8K2T8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Paf1Q8K2T8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Paf1Q8K2T8 Gm42545-201ENSMUST00000202755 922 ntBASIC20.65■□□□□ 0.9
Paf1Q8K2T8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Paf1Q8K2T8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Paf1Q8K2T8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Paf1Q8K2T8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.65■□□□□ 0.9
Paf1Q8K2T8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
Paf1Q8K2T8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Paf1Q8K2T8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Paf1Q8K2T8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Paf1Q8K2T8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Paf1Q8K2T8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Paf1Q8K2T8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Paf1Q8K2T8 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.64■□□□□ 0.89
Paf1Q8K2T8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Paf1Q8K2T8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Paf1Q8K2T8 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.64■□□□□ 0.89
Paf1Q8K2T8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Paf1Q8K2T8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Paf1Q8K2T8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Paf1Q8K2T8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Paf1Q8K2T8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Paf1Q8K2T8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Paf1Q8K2T8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Paf1Q8K2T8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Paf1Q8K2T8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Paf1Q8K2T8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Paf1Q8K2T8 Gm37292-201ENSMUST00000192062 758 ntBASIC20.63■□□□□ 0.89
Paf1Q8K2T8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.63■□□□□ 0.89
Paf1Q8K2T8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Paf1Q8K2T8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Paf1Q8K2T8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Paf1Q8K2T8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Paf1Q8K2T8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.62■□□□□ 0.89
Paf1Q8K2T8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Paf1Q8K2T8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Paf1Q8K2T8 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.62■□□□□ 0.89
Paf1Q8K2T8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
Paf1Q8K2T8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Paf1Q8K2T8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Paf1Q8K2T8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Paf1Q8K2T8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.62■□□□□ 0.89
Paf1Q8K2T8 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.62■□□□□ 0.89
Paf1Q8K2T8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Paf1Q8K2T8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Paf1Q8K2T8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Paf1Q8K2T8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Paf1Q8K2T8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Paf1Q8K2T8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Paf1Q8K2T8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Paf1Q8K2T8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Paf1Q8K2T8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Paf1Q8K2T8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Paf1Q8K2T8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Paf1Q8K2T8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Paf1Q8K2T8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Paf1Q8K2T8 Gm13401-201ENSMUST00000117074 291 ntBASIC20.61■□□□□ 0.89
Paf1Q8K2T8 Gm22240-201ENSMUST00000175225 82 ntBASIC20.61■□□□□ 0.89
Paf1Q8K2T8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Paf1Q8K2T8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Paf1Q8K2T8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Paf1Q8K2T8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Paf1Q8K2T8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.61■□□□□ 0.89
Paf1Q8K2T8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Paf1Q8K2T8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Paf1Q8K2T8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Paf1Q8K2T8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Paf1Q8K2T8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Paf1Q8K2T8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Paf1Q8K2T8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Paf1Q8K2T8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms