Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.6■□□□□ 0.25
Rfwd3Q8CIK8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfwd3Q8CIK8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rfwd3Q8CIK8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfwd3Q8CIK8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rfwd3Q8CIK8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.6■□□□□ 0.25
Rfwd3Q8CIK8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rfwd3Q8CIK8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfwd3Q8CIK8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfwd3Q8CIK8 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.59■□□□□ 0.25
Rfwd3Q8CIK8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfwd3Q8CIK8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.59■□□□□ 0.25
Rfwd3Q8CIK8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfwd3Q8CIK8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfwd3Q8CIK8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfwd3Q8CIK8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.59■□□□□ 0.25
Rfwd3Q8CIK8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfwd3Q8CIK8 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.59■□□□□ 0.25
Rfwd3Q8CIK8 Gm10138-203ENSMUST00000206952 366 ntBASIC16.59■□□□□ 0.25
Rfwd3Q8CIK8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.59■□□□□ 0.25
Rfwd3Q8CIK8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfwd3Q8CIK8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfwd3Q8CIK8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfwd3Q8CIK8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfwd3Q8CIK8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfwd3Q8CIK8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfwd3Q8CIK8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.58■□□□□ 0.25
Rfwd3Q8CIK8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfwd3Q8CIK8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfwd3Q8CIK8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfwd3Q8CIK8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfwd3Q8CIK8 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.58■□□□□ 0.25
Rfwd3Q8CIK8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfwd3Q8CIK8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rfwd3Q8CIK8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rfwd3Q8CIK8 Gm5643-201ENSMUST00000117081 966 ntBASIC16.58■□□□□ 0.24
Rfwd3Q8CIK8 Gm8520-201ENSMUST00000186517 868 ntBASIC16.58■□□□□ 0.24
Rfwd3Q8CIK8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfwd3Q8CIK8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfwd3Q8CIK8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfwd3Q8CIK8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
Rfwd3Q8CIK8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfwd3Q8CIK8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfwd3Q8CIK8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfwd3Q8CIK8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rfwd3Q8CIK8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfwd3Q8CIK8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfwd3Q8CIK8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfwd3Q8CIK8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfwd3Q8CIK8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Rfwd3Q8CIK8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Rfwd3Q8CIK8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rfwd3Q8CIK8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfwd3Q8CIK8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfwd3Q8CIK8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfwd3Q8CIK8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfwd3Q8CIK8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rfwd3Q8CIK8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.57■□□□□ 0.24
Rfwd3Q8CIK8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfwd3Q8CIK8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfwd3Q8CIK8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rfwd3Q8CIK8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfwd3Q8CIK8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Rfwd3Q8CIK8 Gm13168-201ENSMUST00000121771 632 ntBASIC16.56■□□□□ 0.24
Rfwd3Q8CIK8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.56■□□□□ 0.24
Rfwd3Q8CIK8 Grk6-206ENSMUST00000224995 2971 ntBASIC16.56■□□□□ 0.24
Rfwd3Q8CIK8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfwd3Q8CIK8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rfwd3Q8CIK8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfwd3Q8CIK8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rfwd3Q8CIK8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rfwd3Q8CIK8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfwd3Q8CIK8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfwd3Q8CIK8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfwd3Q8CIK8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfwd3Q8CIK8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfwd3Q8CIK8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfwd3Q8CIK8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rfwd3Q8CIK8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rfwd3Q8CIK8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rfwd3Q8CIK8 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.54■□□□□ 0.24
Rfwd3Q8CIK8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfwd3Q8CIK8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rfwd3Q8CIK8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfwd3Q8CIK8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfwd3Q8CIK8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfwd3Q8CIK8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rfwd3Q8CIK8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Rfwd3Q8CIK8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfwd3Q8CIK8 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.54■□□□□ 0.24
Rfwd3Q8CIK8 Mir6349-201ENSMUST00000184059 97 ntBASIC16.54■□□□□ 0.24
Rfwd3Q8CIK8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfwd3Q8CIK8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rfwd3Q8CIK8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfwd3Q8CIK8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rfwd3Q8CIK8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfwd3Q8CIK8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rfwd3Q8CIK8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rfwd3Q8CIK8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfwd3Q8CIK8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms