Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pdlim5Q8CI51 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.24■□□□□ 0.19
Pdlim5Q8CI51 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim5Q8CI51 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim5Q8CI51 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim5Q8CI51 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim5Q8CI51 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pdlim5Q8CI51 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim5Q8CI51 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pdlim5Q8CI51 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim5Q8CI51 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.23■□□□□ 0.19
Pdlim5Q8CI51 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Pdlim5Q8CI51 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim5Q8CI51 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim5Q8CI51 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Pdlim5Q8CI51 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Pdlim5Q8CI51 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pdlim5Q8CI51 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim5Q8CI51 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pdlim5Q8CI51 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.23■□□□□ 0.19
Pdlim5Q8CI51 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim5Q8CI51 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim5Q8CI51 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim5Q8CI51 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.23■□□□□ 0.19
Pdlim5Q8CI51 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pdlim5Q8CI51 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 Gm37179-201ENSMUST00000194862 823 ntBASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pdlim5Q8CI51 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim5Q8CI51 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.21■□□□□ 0.19
Pdlim5Q8CI51 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim5Q8CI51 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim5Q8CI51 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim5Q8CI51 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim5Q8CI51 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim5Q8CI51 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
Pdlim5Q8CI51 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pdlim5Q8CI51 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim5Q8CI51 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim5Q8CI51 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim5Q8CI51 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim5Q8CI51 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pdlim5Q8CI51 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pdlim5Q8CI51 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pdlim5Q8CI51 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.21■□□□□ 0.18
Pdlim5Q8CI51 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.2■□□□□ 0.18
Pdlim5Q8CI51 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim5Q8CI51 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.19■□□□□ 0.18
Pdlim5Q8CI51 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim5Q8CI51 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.19■□□□□ 0.18
Pdlim5Q8CI51 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim5Q8CI51 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Pdlim5Q8CI51 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
Pdlim5Q8CI51 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim5Q8CI51 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim5Q8CI51 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.19■□□□□ 0.18
Pdlim5Q8CI51 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim5Q8CI51 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.19■□□□□ 0.18
Pdlim5Q8CI51 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.19■□□□□ 0.18
Pdlim5Q8CI51 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Pdlim5Q8CI51 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim5Q8CI51 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms